Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27703826-27803876

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pacsin1	17	27655591 to 27711118	55527	+	protein coding gene	protein kinase C and casein kinase substrate in neurons 1
Tssr143358	17	27704472 to 27704487	15	+	TSS region	transcription start site region 143358
Tssr143359	17	27704500 to 27704505	5	+	TSS region	transcription start site region 143359
Cpgi8854	17	27707883 to 27708040	157		CpG island	CpG island 8854
Spdef	17	27714352 to 27728955	14603	-	protein coding gene	SAM pointed domain containing ets transcription factor
Cpgi8855	17	27717013 to 27717388	375		CpG island	CpG island 8855
Tssr147062	17	27728937 to 27728956	19	-	TSS region	transcription start site region 147062
Tssr147063	17	27729074 to 27729086	12	-	TSS region	transcription start site region 147063
Gm15458	17	27735220 to 27741492	6272	+	lincRNA gene	predicted gene 15458
Ilrun	17	27751232 to 27820542	69310	-	protein coding gene	inflammation and lipid regulator with UBA-like and NBR1-like domains
Tssr147064	17	27753826 to 27753876	50	-	TSS region	transcription start site region 147064
Tssr147065	17	27777937 to 27777948	11	-	TSS region	transcription start site region 147065
Rps2-ps9	17	27784379 to 27785246	867	+	pseudogene	ribosomal protein S2, pseudogene 9
Tssr147066	17	27797572 to 27797574	2	-	TSS region	transcription start site region 147066