Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27658937-27798956

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(17D17Jcs40-D17Mit198)7Jcs 17 24928286 to 27659245 2730959 chromosomal deletion deletion, Chr 17, John C Schimenti 7
Pacsin1 17 27655591 to 27711118 55527 + protein coding gene protein kinase C and casein kinase substrate in neurons 1
Tir9 17 27659145 to 43574223 15915078 QTL trypanosome infection response 9
Asbb3 17 27659145 to 27659245 100 QTL autoimmune susceptibility in C57BL/6J and BALB/c 3
D17Mit198 17 27659145 to 27659245 100 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 198
D17Dcr1 17 27659146 to 27659250 104 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 1
Cpgi8851 17 27684721 to 27685806 1085 CpG island CpG island 8851
Tssr143354 17 27685218 to 27685233 15 + TSS region transcription start site region 143354
Tssr143355 17 27685249 to 27685258 9 + TSS region transcription start site region 143355
Cpgi8852 17 27686137 to 27686336 199 CpG island CpG island 8852
Tssr143356 17 27702522 to 27702525 3 + TSS region transcription start site region 143356
Cpgi8853 17 27702609 to 27702871 262 CpG island CpG island 8853
Tssr143357 17 27702715 to 27702741 26 + TSS region transcription start site region 143357
Tssr143358 17 27704472 to 27704487 15 + TSS region transcription start site region 143358
Tssr143359 17 27704500 to 27704505 5 + TSS region transcription start site region 143359
Cpgi8854 17 27707883 to 27708040 157 CpG island CpG island 8854
Spdef 17 27714352 to 27728955 14603 - protein coding gene SAM pointed domain containing ets transcription factor
Cpgi8855 17 27717013 to 27717388 375 CpG island CpG island 8855
Tssr147062 17 27728937 to 27728956 19 - TSS region transcription start site region 147062
Tssr147063 17 27729074 to 27729086 12 - TSS region transcription start site region 147063
Gm15458 17 27735220 to 27741492 6272 + lincRNA gene predicted gene 15458
Ilrun 17 27751232 to 27820542 69310 - protein coding gene inflammation and lipid regulator with UBA-like and NBR1-like domains
Tssr147064 17 27753826 to 27753876 50 - TSS region transcription start site region 147064
Tssr147065 17 27777937 to 27777948 11 - TSS region transcription start site region 147065
Rps2-ps9 17 27784379 to 27785246 867 + pseudogene ribosomal protein S2, pseudogene 9
Tssr147066 17 27797572 to 27797574 2 - TSS region transcription start site region 147066