Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27658937-27798956

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(17D17Jcs40-D17Mit198)7Jcs 17 24928286 to 27659245 2730959 chromosomal deletion deletion, Chr 17, John C Schimenti 7
Pacsin1 17 27655591 to 27711118 55527 + protein coding gene protein kinase C and casein kinase substrate in neurons 1
Asbb3 17 27659145 to 27659245 100 QTL autoimmune susceptibility in C57BL/6J and BALB/c 3
D17Mit198 17 27659145 to 27659245 100 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 198
Tir9 17 27659145 to 43574223 15915078 QTL trypanosome infection response 9
D17Dcr1 17 27659146 to 27659250 104 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 1
Cpgi8851 17 27684721 to 27685806 1085 CpG island CpG island 8851
Tssr143354 17 27685218 to 27685233 15 + TSS region transcription start site region 143354
Tssr143355 17 27685249 to 27685258 9 + TSS region transcription start site region 143355
Cpgi8852 17 27686137 to 27686336 199 CpG island CpG island 8852
Tssr143356 17 27702522 to 27702525 3 + TSS region transcription start site region 143356
Cpgi8853 17 27702609 to 27702871 262 CpG island CpG island 8853
Tssr143357 17 27702715 to 27702741 26 + TSS region transcription start site region 143357
Tssr143358 17 27704472 to 27704487 15 + TSS region transcription start site region 143358
Tssr143359 17 27704500 to 27704505 5 + TSS region transcription start site region 143359
Cpgi8854 17 27707883 to 27708040 157 CpG island CpG island 8854
Spdef 17 27714352 to 27728955 14603 - protein coding gene SAM pointed domain containing ets transcription factor
Cpgi8855 17 27717013 to 27717388 375 CpG island CpG island 8855
Tssr147062 17 27728937 to 27728956 19 - TSS region transcription start site region 147062
Tssr147063 17 27729074 to 27729086 12 - TSS region transcription start site region 147063
Gm15458 17 27735220 to 27741492 6272 + lincRNA gene predicted gene 15458
Ilrun 17 27751232 to 27820542 69310 - protein coding gene inflammation and lipid regulator with UBA-like and NBR1-like domains
Tssr147064 17 27753826 to 27753876 50 - TSS region transcription start site region 147064
Tssr147065 17 27777937 to 27777948 11 - TSS region transcription start site region 147065
Rps2-ps9 17 27784379 to 27785246 867 + pseudogene ribosomal protein S2, pseudogene 9
Tssr147066 17 27797572 to 27797574 2 - TSS region transcription start site region 147066