Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27620238-27650267

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nudt3 17 27579382 to 27623452 44070 - protein coding gene nudix (nucleotide diphosphate linked moiety X)-type motif 3
Gm49804 17 27580780 to 27635222 54442 - protein coding gene predicted gene, 49804
Tssr143348 17 27622256 to 27622267 11 + TSS region transcription start site region 143348
Cpgi8846 17 27622583 to 27623942 1359 CpG island CpG island 8846
Tssr147053 17 27622785 to 27622854 69 - TSS region transcription start site region 147053
Tssr147054 17 27623336 to 27623345 9 - TSS region transcription start site region 147054
Tssr147055 17 27623379 to 27623390 11 - TSS region transcription start site region 147055
Tssr147056 17 27623391 to 27623416 25 - TSS region transcription start site region 147056
Tssr147057 17 27623441 to 27623495 54 - TSS region transcription start site region 147057
Gm49741 17 27623497 to 27624265 768 + bidirectional promoter lncRNA gene predicted gene, 49741
Tssr147058 17 27623757 to 27623785 28 - TSS region transcription start site region 147058
Tssr147059 17 27623788 to 27623815 27 - TSS region transcription start site region 147059
Tssr147060 17 27623820 to 27623831 11 - TSS region transcription start site region 147060
Rps10 17 27630420 to 27635481 5061 - protein coding gene ribosomal protein S10
Cpgi8847 17 27634660 to 27635561 901 CpG island CpG island 8847
Tssr147061 17 27635238 to 27635267 29 - TSS region transcription start site region 147061
Gm15420 17 27635343 to 27636868 1525 + antisense lncRNA gene predicted gene 15420
Cpgi8848 17 27639079 to 27639453 374 CpG island CpG island 8848
Cpgi8849 17 27650208 to 27650398 190 CpG island CpG island 8849