Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Del(17D17Jcs40-D17Mit198)7Jcs | 17 | 2730959 | chromosomal deletion | deletion, Chr 17, John C Schimenti 7 | ||
Hmga1 | 17 | 7098 | + | protein coding gene | high mobility group AT-hook 1 | |
Tssr143344 | 17 | 9 | + | TSS region | transcription start site region 143344 | |
Tssr143345 | 17 | 7 | + | TSS region | transcription start site region 143345 | |
Tssr143346 | 17 | 7 | + | TSS region | transcription start site region 143346 | |
Tssr143347 | 17 | 14 | + | TSS region | transcription start site region 143347 | |
AI413582 | 17 | 1967 | - | protein coding gene | expressed sequence AI413582 | |
Cpgi8845 | 17 | 1146 | CpG island | CpG island 8845 | ||
C130040N14Rik | 17 | 1108 | + | antisense lncRNA gene | RIKEN cDNA C130040N14 gene | |
Tssr147045 | 17 | 79 | - | TSS region | transcription start site region 147045 | |
Nudt3 | 17 | 44070 | - | protein coding gene | nudix (nucleotide diphosphate linked moiety X)-type motif 3 | |
Tssr147046 | 17 | 3 | - | TSS region | transcription start site region 147046 | |
Tssr147047 | 17 | 2 | - | TSS region | transcription start site region 147047 | |
Tssr147048 | 17 | 12 | - | TSS region | transcription start site region 147048 | |
Gm49804 | 17 | 54442 | - | protein coding gene | predicted gene, 49804 | |
Tssr147049 | 17 | 37 | - | TSS region | transcription start site region 147049 | |
Tssr147050 | 17 | 8 | - | TSS region | transcription start site region 147050 | |
Tssr147051 | 17 | 20 | - | TSS region | transcription start site region 147051 | |
Tssr147052 | 17 | 29 | - | TSS region | transcription start site region 147052 | |
Tssr143348 | 17 | 11 | + | TSS region | transcription start site region 143348 | |
Cpgi8846 | 17 | 1359 | CpG island | CpG island 8846 | ||
Tssr147053 | 17 | 69 | - | TSS region | transcription start site region 147053 | |
Tssr147054 | 17 | 9 | - | TSS region | transcription start site region 147054 | |
Tssr147055 | 17 | 11 | - | TSS region | transcription start site region 147055 | |
Tssr147056 | 17 | 25 | - | TSS region | transcription start site region 147056 | |
Tssr147057 | 17 | 54 | - | TSS region | transcription start site region 147057 | |
Gm49741 | 17 | 768 | + | bidirectional promoter lncRNA gene | predicted gene, 49741 | |
Tssr147058 | 17 | 28 | - | TSS region | transcription start site region 147058 | |
Tssr147059 | 17 | 27 | - | TSS region | transcription start site region 147059 | |
Tssr147060 | 17 | 11 | - | TSS region | transcription start site region 147060 | |
Rps10 | 17 | 5061 | - | protein coding gene | ribosomal protein S10 | |
Cpgi8847 | 17 | 901 | CpG island | CpG island 8847 | ||
Tssr147061 | 17 | 29 | - | TSS region | transcription start site region 147061 | |
Gm15420 | 17 | 1525 | + | antisense lncRNA gene | predicted gene 15420 | |
Cpgi8848 | 17 | 374 | CpG island | CpG island 8848 | ||
Cpgi8849 | 17 | 190 | CpG island | CpG island 8849 | ||
Cpgi8850 | 17 | 1376 | CpG island | CpG island 8850 | ||
Tssr143349 | 17 | 11 | + | TSS region | transcription start site region 143349 | |
Tssr143350 | 17 | 23 | + | TSS region | transcription start site region 143350 | |
Tssr143351 | 17 | 50 | + | TSS region | transcription start site region 143351 | |
Pacsin1 | 17 | 55527 | + | protein coding gene | protein kinase C and casein kinase substrate in neurons 1 | |
Tssr143352 | 17 | 3 | + | TSS region | transcription start site region 143352 | |
Tssr143353 | 17 | 4 | + | TSS region | transcription start site region 143353 | |
D17Mit198 | 17 | 100 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 198 | ||
Tir9 | 17 | 15915078 | QTL | trypanosome infection response 9 | ||
Asbb3 | 17 | 100 | QTL | autoimmune susceptibility in C57BL/6J and BALB/c 3 | ||
D17Dcr1 | 17 | 104 | DNA segment | DNA Segment, Chr 17, Derry C. Roopenian 1 | ||
Cpgi8851 | 17 | 1085 | CpG island | CpG island 8851 | ||
Tssr143354 | 17 | 15 | + | TSS region | transcription start site region 143354 | |
Tssr143355 | 17 | 9 | + | TSS region | transcription start site region 143355 | |
Cpgi8852 | 17 | 199 | CpG island | CpG island 8852 | ||
Tssr143356 | 17 | 3 | + | TSS region | transcription start site region 143356 | |
Cpgi8853 | 17 | 262 | CpG island | CpG island 8853 | ||
Tssr143357 | 17 | 26 | + | TSS region | transcription start site region 143357 | |
Tssr143358 | 17 | 15 | + | TSS region | transcription start site region 143358 | |
Tssr143359 | 17 | 5 | + | TSS region | transcription start site region 143359 | |
Cpgi8854 | 17 | 157 | CpG island | CpG island 8854 | ||
Spdef | 17 | 14603 | - | protein coding gene | SAM pointed domain containing ets transcription factor | |
Cpgi8855 | 17 | 375 | CpG island | CpG island 8855 | ||
Tssr147062 | 17 | 19 | - | TSS region | transcription start site region 147062 | |
Tssr147063 | 17 | 12 | - | TSS region | transcription start site region 147063 | |
Gm15458 | 17 | 6272 | + | lincRNA gene | predicted gene 15458 | |
Ilrun | 17 | 69310 | - | protein coding gene | inflammation and lipid regulator with UBA-like and NBR1-like domains | |
Tssr147064 | 17 | 50 | - | TSS region | transcription start site region 147064 | |
Tssr147065 | 17 | 11 | - | TSS region | transcription start site region 147065 | |
Rps2-ps9 | 17 | 867 | + | pseudogene | ribosomal protein S2, pseudogene 9 | |
Tssr147066 | 17 | 2 | - | TSS region | transcription start site region 147066 | |
Cpgi8856 | 17 | 1416 | CpG island | CpG island 8856 | ||
Tssr147067 | 17 | 19 | - | TSS region | transcription start site region 147067 | |
Tssr147068 | 17 | 9 | - | TSS region | transcription start site region 147068 | |
Tssr147069 | 17 | 31 | - | TSS region | transcription start site region 147069 | |
Tssr147070 | 17 | 38 | - | TSS region | transcription start site region 147070 | |
Tssr147071 | 17 | 70 | - | TSS region | transcription start site region 147071 | |
Tssr143360 | 17 | 20 | + | TSS region | transcription start site region 143360 | |
Tssr143361 | 17 | 21 | + | TSS region | transcription start site region 143361 | |
Tssr147072 | 17 | 7 | - | TSS region | transcription start site region 147072 | |
Tssr147073 | 17 | 34 | - | TSS region | transcription start site region 147073 | |
Cpgi8857 | 17 | 550 | CpG island | CpG island 8857 | ||
Tssr143362 | 17 | 62 | + | TSS region | transcription start site region 143362 | |
Snrpc | 17 | 11881 | + | protein coding gene | U1 small nuclear ribonucleoprotein C | |
Tssr143363 | 17 | 18 | + | TSS region | transcription start site region 143363 | |
Tssr143364 | 17 | 21 | + | TSS region | transcription start site region 143364 | |
Tssr143365 | 17 | 11 | + | TSS region | transcription start site region 143365 | |
Tssr143366 | 17 | 14 | + | TSS region | transcription start site region 143366 | |
Cpgi8858 | 17 | 1167 | CpG island | CpG island 8858 | ||
Tssr143367 | 17 | 68 | + | TSS region | transcription start site region 143367 | |
Uhrf1bp1 | 17 | 43533 | + | protein coding gene | UHRF1 (ICBP90) binding protein 1 | |
Tssr143368 | 17 | 24 | + | TSS region | transcription start site region 143368 | |
Tssr143369 | 17 | 7 | + | TSS region | transcription start site region 143369 | |
Gm49803 | 17 | 497 | - | pseudogene | predicted gene, 49803 | |
Taf11 | 17 | 8114 | - | protein coding gene | TATA-box binding protein associated factor 11 | |
Tssr147074 | 17 | 6 | - | TSS region | transcription start site region 147074 | |
Cpgi8859 | 17 | 831 | CpG island | CpG island 8859 | ||
Tssr147075 | 17 | 64 | - | TSS region | transcription start site region 147075 | |
Gm49801 | 17 | 546 | + | antisense lncRNA gene | predicted gene, 49801 | |
Tssr143370 | 17 | 12 | + | TSS region | transcription start site region 143370 | |
Cpgi8860 | 17 | 1613 | CpG island | CpG island 8860 | ||
Tssr147076 | 17 | 36 | - | TSS region | transcription start site region 147076 | |
Tssr147077 | 17 | 58 | - | TSS region | transcription start site region 147077 | |
Tssr143371 | 17 | 27 | + | TSS region | transcription start site region 143371 | |
Anks1 | 17 | 153469 | + | protein coding gene | ankyrin repeat and SAM domain containing 1 | |
Tssr143372 | 17 | 72 | + | TSS region | transcription start site region 143372 | |
Tssr147078 | 17 | 12 | - | TSS region | transcription start site region 147078 | |
Tssr147079 | 17 | 49 | - | TSS region | transcription start site region 147079 | |
Tssr5054 | 17 | 9 | - | TSS region | transcription start site region 5054 | |
Gm15597 | 17 | 5701 | - | antisense lncRNA gene | predicted gene 15597 | |
Tssr147080 | 17 | 9 | - | TSS region | transcription start site region 147080 | |
Tssr143373 | 17 | 24 | + | TSS region | transcription start site region 143373 | |
Gm49802 | 17 | 766 | + | sense intronic lncRNA gene | predicted gene, 49802 | |
Cpgi8861 | 17 | 337 | CpG island | CpG island 8861 | ||
Gm35290 | 17 | 1297 | - | antisense lncRNA gene | predicted gene, 35290 | |
Tssr143374 | 17 | 63 | + | TSS region | transcription start site region 143374 | |
Tssr143375 | 17 | 31 | + | TSS region | transcription start site region 143375 | |
Tssr143376 | 17 | 19 | + | TSS region | transcription start site region 143376 | |
Tssr143377 | 17 | 14 | + | TSS region | transcription start site region 143377 | |
Tssr143378 | 17 | 46 | + | TSS region | transcription start site region 143378 | |
Tssr143379 | 17 | 9 | + | TSS region | transcription start site region 143379 | |
Tssr143380 | 17 | 37 | + | TSS region | transcription start site region 143380 | |
Cpgi8862 | 17 | 185 | CpG island | CpG island 8862 | ||
Tssr143381 | 17 | 28 | + | TSS region | transcription start site region 143381 | |
Tssr147081 | 17 | 28 | - | TSS region | transcription start site region 147081 | |
Cpgi8863 | 17 | 264 | CpG island | CpG island 8863 | ||
Tssr143382 | 17 | 30 | + | TSS region | transcription start site region 143382 | |
Tssr143383 | 17 | 31 | + | TSS region | transcription start site region 143383 | |
Tssr143384 | 17 | 18 | + | TSS region | transcription start site region 143384 | |
Cpgi8864 | 17 | 289 | CpG island | CpG island 8864 | ||
Tcp11 | 17 | 13894 | - | protein coding gene | t-complex protein 11 | |
Tssr147082 | 17 | 29 | - | TSS region | transcription start site region 147082 | |
Tssr147083 | 17 | 6 | - | TSS region | transcription start site region 147083 | |
Tssr147084 | 17 | 10 | - | TSS region | transcription start site region 147084 | |
Tssr147085 | 17 | 28 | - | TSS region | transcription start site region 147085 | |
Tssr143385 | 17 | 25 | + | TSS region | transcription start site region 143385 | |
Tssr147086 | 17 | 20 | - | TSS region | transcription start site region 147086 | |
4930526A20Rik | 17 | 1292 | - | pseudogene | RIKEN cDNA 4930526A20 gene | |
Cpgi8865 | 17 | 1322 | CpG island | CpG island 8865 | ||
Tssr147087 | 17 | 28 | - | TSS region | transcription start site region 147087 | |
Tssr147088 | 17 | 10 | - | TSS region | transcription start site region 147088 | |
Tssr143386 | 17 | 17 | + | TSS region | transcription start site region 143386 | |
Tssr147089 | 17 | 40 | - | TSS region | transcription start site region 147089 | |
Tssr147090 | 17 | 24 | - | TSS region | transcription start site region 147090 | |
Tssr147091 | 17 | 26 | - | TSS region | transcription start site region 147091 | |
Tssr147092 | 17 | 8 | - | TSS region | transcription start site region 147092 | |
Tssr147093 | 17 | 7 | - | TSS region | transcription start site region 147093 | |
Tssr147094 | 17 | 11 | - | TSS region | transcription start site region 147094 | |
Tssr147095 | 17 | 20 | - | TSS region | transcription start site region 147095 | |
Tssr147096 | 17 | 44 | - | TSS region | transcription start site region 147096 | |
Cpgi8866 | 17 | 188 | CpG island | CpG island 8866 | ||
Tssr143387 | 17 | 2 | + | TSS region | transcription start site region 143387 | |
Cpgi8867 | 17 | 420 | CpG island | CpG island 8867 | ||
Tssr143388 | 17 | 7 | + | TSS region | transcription start site region 143388 | |
D17Mit226 | 17 | 113 | DNA segment | DNA Segment, Chr 17, Massachusetts Institute of Technology 226 | ||
Cpgi8868 | 17 | 189 | CpG island | CpG island 8868 | ||
Gm49897 | 17 | 478 | - | unclassified gene | predicted gene, 49897 | |
Cpgi8869 | 17 | 1891 | CpG island | CpG island 8869 | ||
Scube3 | 17 | 32713 | + | protein coding gene | signal peptide, CUB domain, EGF-like 3 | |
Tssr143389 | 17 | 11 | + | TSS region | transcription start site region 143389 | |
Tssr143390 | 17 | 54 | + | TSS region | transcription start site region 143390 | |
Tssr143391 | 17 | 4 | + | TSS region | transcription start site region 143391 | |
C230013L11Rik | 17 | 3025 | - | bidirectional promoter lncRNA gene | RIKEN cDNA C230013L11 gene | |
Cpgi8870 | 17 | 1401 | CpG island | CpG island 8870 | ||
Zfp523 | 17 | 28757 | + | protein coding gene | zinc finger protein 523 | |
Tssr143392 | 17 | 84 | + | TSS region | transcription start site region 143392 | |
Tssr143393 | 17 | 53 | + | TSS region | transcription start site region 143393 | |
Tssr147097 | 17 | 41 | - | TSS region | transcription start site region 147097 | |
Cpgi8871 | 17 | 321 | CpG island | CpG island 8871 | ||
Def6 | 17 | 20830 | + | protein coding gene | differentially expressed in FDCP 6 | |
Tssr143394 | 17 | 19 | + | TSS region | transcription start site region 143394 | |
Tssr143395 | 17 | 73 | + | TSS region | transcription start site region 143395 | |
Tssr143396 | 17 | 44 | + | TSS region | transcription start site region 143396 | |
D17Mit262 | 17 | 81 | DNA segment | DNA Segment, Chr 17, Massachusetts Institute of Technology 262 | ||
Tssr147098 | 17 | 6 | - | TSS region | transcription start site region 147098 | |
Tssr147099 | 17 | 11 | - | TSS region | transcription start site region 147099 | |
Tssr143397 | 17 | 4 | + | TSS region | transcription start site region 143397 | |
Tssr143398 | 17 | 2 | + | TSS region | transcription start site region 143398 | |
Tssr143399 | 17 | 5 | + | TSS region | transcription start site region 143399 | |
Gm49874 | 17 | 1063 | - | antisense lncRNA gene | predicted gene, 49874 | |
Cpgi8872 | 17 | 781 | CpG island | CpG island 8872 | ||
Tssr147100 | 17 | 15 | - | TSS region | transcription start site region 147100 | |
Cpgi8873 | 17 | 660 | CpG island | CpG island 8873 | ||
Tssr143400 | 17 | 4 | + | TSS region | transcription start site region 143400 | |
Cpgi8874 | 17 | 968 | CpG island | CpG island 8874 | ||
Tssr147101 | 17 | 23 | - | TSS region | transcription start site region 147101 | |
Tssr143401 | 17 | 66 | + | TSS region | transcription start site region 143401 | |
Ppard | 17 | 68715 | + | protein coding gene | peroxisome proliferator activator receptor delta | |
Tssr143402 | 17 | 35 | + | TSS region | transcription start site region 143402 | |
Tssr143403 | 17 | 43 | + | TSS region | transcription start site region 143403 | |
Tssr143404 | 17 | 1 | + | TSS region | transcription start site region 143404 |