Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27560608-27600620

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hmga1 17 27556574 to 27563672 7098 + protein coding gene high mobility group AT-hook 1
Tssr143344 17 27561306 to 27561315 9 + TSS region transcription start site region 143344
Tssr143345 17 27561340 to 27561347 7 + TSS region transcription start site region 143345
Tssr143346 17 27561352 to 27561359 7 + TSS region transcription start site region 143346
Tssr143347 17 27561363 to 27561377 14 + TSS region transcription start site region 143347
AI413582 17 27563769 to 27565736 1967 - protein coding gene expressed sequence AI413582
Cpgi8845 17 27565056 to 27566202 1146 CpG island CpG island 8845
C130040N14Rik 17 27565117 to 27566225 1108 + antisense lncRNA gene RIKEN cDNA C130040N14 gene
Tssr147045 17 27565678 to 27565757 79 - TSS region transcription start site region 147045
Nudt3 17 27579382 to 27623452 44070 - protein coding gene nudix (nucleotide diphosphate linked moiety X)-type motif 3
Tssr147046 17 27580216 to 27580219 3 - TSS region transcription start site region 147046
Tssr147047 17 27580423 to 27580425 2 - TSS region transcription start site region 147047
Tssr147048 17 27580608 to 27580620 12 - TSS region transcription start site region 147048
Gm49804 17 27580780 to 27635222 54442 - protein coding gene predicted gene, 49804
Tssr147049 17 27596813 to 27596850 37 - TSS region transcription start site region 147049
Tssr147050 17 27596911 to 27596919 8 - TSS region transcription start site region 147050
Tssr147051 17 27597176 to 27597196 20 - TSS region transcription start site region 147051
Tssr147052 17 27597197 to 27597226 29 - TSS region transcription start site region 147052