Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:27505117-27626225

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grm4 17 27422387 to 27513678 91291 - protein coding gene glutamate receptor, metabotropic 4
Cpgi8842 17 27511525 to 27514176 2651 CpG island CpG island 8842
Tssr147040 17 27513378 to 27513383 5 - TSS region transcription start site region 147040
Tssr147041 17 27513387 to 27513405 18 - TSS region transcription start site region 147041
Cpgi8843 17 27520632 to 27521123 491 CpG island CpG island 8843
Gm16005 17 27522573 to 27522844 271 + pseudogene predicted gene 16005
Tssr143322 17 27529989 to 27529994 5 + TSS region transcription start site region 143322
Gm9703 17 27530067 to 27530412 345 + pseudogene predicted gene 9703
Tssr5053 17 27534943 to 27534944 1 + TSS region transcription start site region 5053
Gm49774 17 27545707 to 27556518 10811 - antisense lncRNA gene predicted gene, 49774
Tssr147042 17 27547330 to 27547337 7 - TSS region transcription start site region 147042
Tssr147043 17 27547346 to 27547357 11 - TSS region transcription start site region 147043
Gm49773 17 27552972 to 27553323 351 + unclassified gene predicted gene, 49773
Tssr143323 17 27554580 to 27554626 46 + TSS region transcription start site region 143323
Cpgi8844 17 27554960 to 27558053 3093 CpG island CpG island 8844
Tssr143324 17 27555519 to 27555528 9 + TSS region transcription start site region 143324
Tssr143325 17 27555558 to 27555603 45 + TSS region transcription start site region 143325
Tssr143326 17 27555635 to 27555646 11 + TSS region transcription start site region 143326
Tssr143327 17 27555816 to 27555834 18 + TSS region transcription start site region 143327
Tssr143328 17 27555851 to 27555865 14 + TSS region transcription start site region 143328
Tssr147044 17 27556505 to 27556511 6 - TSS region transcription start site region 147044
Hmga1 17 27556574 to 27563672 7098 + protein coding gene high mobility group AT-hook 1
Tssr143329 17 27556580 to 27556593 13 + TSS region transcription start site region 143329
Tssr143330 17 27556601 to 27556612 11 + TSS region transcription start site region 143330
Tssr143331 17 27556613 to 27556635 22 + TSS region transcription start site region 143331
Tssr143332 17 27556643 to 27556652 9 + TSS region transcription start site region 143332
Tssr143333 17 27556677 to 27556690 13 + TSS region transcription start site region 143333
Tssr143334 17 27556706 to 27556717 11 + TSS region transcription start site region 143334
Tssr143335 17 27556761 to 27556779 18 + TSS region transcription start site region 143335
Tssr143336 17 27556801 to 27556814 13 + TSS region transcription start site region 143336
Tssr143337 17 27556843 to 27556858 15 + TSS region transcription start site region 143337
Tssr143338 17 27556873 to 27556885 12 + TSS region transcription start site region 143338
Tssr143339 17 27556920 to 27556932 12 + TSS region transcription start site region 143339
Tssr143340 17 27556942 to 27556963 21 + TSS region transcription start site region 143340
Tssr143341 17 27556977 to 27556989 12 + TSS region transcription start site region 143341
Tssr143342 17 27557461 to 27557507 46 + TSS region transcription start site region 143342
Tssr143343 17 27557898 to 27557915 17 + TSS region transcription start site region 143343
Tssr143344 17 27561306 to 27561315 9 + TSS region transcription start site region 143344
Tssr143345 17 27561340 to 27561347 7 + TSS region transcription start site region 143345
Tssr143346 17 27561352 to 27561359 7 + TSS region transcription start site region 143346
Tssr143347 17 27561363 to 27561377 14 + TSS region transcription start site region 143347
AI413582 17 27563769 to 27565736 1967 - protein coding gene expressed sequence AI413582
Cpgi8845 17 27565056 to 27566202 1146 CpG island CpG island 8845
C130040N14Rik 17 27565117 to 27566225 1108 + antisense lncRNA gene RIKEN cDNA C130040N14 gene
Tssr147045 17 27565678 to 27565757 79 - TSS region transcription start site region 147045
Nudt3 17 27579382 to 27623452 44070 - protein coding gene nudix (nucleotide diphosphate linked moiety X)-type motif 3
Tssr147046 17 27580216 to 27580219 3 - TSS region transcription start site region 147046
Tssr147047 17 27580423 to 27580425 2 - TSS region transcription start site region 147047
Tssr147048 17 27580608 to 27580620 12 - TSS region transcription start site region 147048
Gm49804 17 27580780 to 27635222 54442 - protein coding gene predicted gene, 49804
Tssr147049 17 27596813 to 27596850 37 - TSS region transcription start site region 147049
Tssr147050 17 27596911 to 27596919 8 - TSS region transcription start site region 147050
Tssr147051 17 27597176 to 27597196 20 - TSS region transcription start site region 147051
Tssr147052 17 27597197 to 27597226 29 - TSS region transcription start site region 147052
Tssr143348 17 27622256 to 27622267 11 + TSS region transcription start site region 143348
Cpgi8846 17 27622583 to 27623942 1359 CpG island CpG island 8846
Tssr147053 17 27622785 to 27622854 69 - TSS region transcription start site region 147053
Tssr147054 17 27623336 to 27623345 9 - TSS region transcription start site region 147054
Tssr147055 17 27623379 to 27623390 11 - TSS region transcription start site region 147055
Tssr147056 17 27623391 to 27623416 25 - TSS region transcription start site region 147056
Tssr147057 17 27623441 to 27623495 54 - TSS region transcription start site region 147057
Gm49741 17 27623497 to 27624265 768 + bidirectional promoter lncRNA gene predicted gene, 49741
Tssr147058 17 27623757 to 27623785 28 - TSS region transcription start site region 147058
Tssr147059 17 27623788 to 27623815 27 - TSS region transcription start site region 147059
Tssr147060 17 27623820 to 27623831 11 - TSS region transcription start site region 147060