Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Del(17D17Jcs40-D17Mit198)7Jcs | 17 | 2730959 | chromosomal deletion | deletion, Chr 17, John C Schimenti 7 | ||
Itpr3 | 17 | 64919 | + | protein coding gene | inositol 1,4,5-triphosphate receptor 3 | |
Cpgi8834 | 17 | 192 | CpG island | CpG island 8834 | ||
Cpgi8835 | 17 | 211 | CpG island | CpG island 8835 | ||
Tssr143312 | 17 | 4 | + | TSS region | transcription start site region 143312 | |
Uqcc2 | 17 | 11226 | - | protein coding gene | ubiquinol-cytochrome c reductase complex assembly factor 2 | |
Cpgi8836 | 17 | 168 | CpG island | CpG island 8836 | ||
Cpgi8837 | 17 | 724 | CpG island | CpG island 8837 | ||
Tssr147003 | 17 | 11 | - | TSS region | transcription start site region 147003 | |
Tssr147004 | 17 | 22 | - | TSS region | transcription start site region 147004 | |
Tssr147005 | 17 | 15 | - | TSS region | transcription start site region 147005 | |
Tssr147006 | 17 | 18 | - | TSS region | transcription start site region 147006 | |
Tssr147007 | 17 | 18 | - | TSS region | transcription start site region 147007 | |
Ip6k3 | 17 | 23793 | - | protein coding gene | inositol hexaphosphate kinase 3 | |
Tssr147008 | 17 | 31 | - | TSS region | transcription start site region 147008 | |
Tssr147009 | 17 | 9 | - | TSS region | transcription start site region 147009 | |
Tssr147010 | 17 | 18 | - | TSS region | transcription start site region 147010 | |
Tssr147011 | 17 | 12 | - | TSS region | transcription start site region 147011 | |
Lemd2 | 17 | 14837 | - | protein coding gene | LEM domain containing 2 | |
Gm26724 | 17 | 2039 | + | lincRNA gene | predicted gene, 26724 | |
Tssr147012 | 17 | 1 | - | TSS region | transcription start site region 147012 | |
Cpgi8838 | 17 | 1678 | CpG island | CpG island 8838 | ||
Tssr143313 | 17 | 17 | + | TSS region | transcription start site region 143313 | |
Tssr143314 | 17 | 5 | + | TSS region | transcription start site region 143314 | |
Tssr147013 | 17 | 90 | - | TSS region | transcription start site region 147013 | |
Tssr147014 | 17 | 27 | - | TSS region | transcription start site region 147014 | |
Gm34736 | 17 | 9295 | + | lncRNA gene | predicted gene, 34736 | |
9630028I04Rik | 17 | 12991 | - | lncRNA gene | RIKEN cDNA 9630028I04 gene | |
Tssr147015 | 17 | 55 | - | TSS region | transcription start site region 147015 | |
Tssr147016 | 17 | 10 | - | TSS region | transcription start site region 147016 | |
Gm49793 | 17 | 10380 | - | lincRNA gene | predicted gene, 49793 | |
Mir7214 | 17 | 60 | - | miRNA gene | microRNA 7214 | |
Tssr147017 | 17 | 11 | - | TSS region | transcription start site region 147017 | |
Tssr147018 | 17 | 41 | - | TSS region | transcription start site region 147018 | |
4930556A12Rik | 17 | 1142 | unclassified gene | RIKEN cDNA 4930556A12 gene | ||
Tssr147019 | 17 | 11 | - | TSS region | transcription start site region 147019 | |
Gm10505 | 17 | 19798 | + | lincRNA gene | predicted gene 10505 | |
Tssr147020 | 17 | 8 | - | TSS region | transcription start site region 147020 | |
Cpgi8839 | 17 | 758 | CpG island | CpG island 8839 | ||
Tssr143315 | 17 | 4 | + | TSS region | transcription start site region 143315 | |
4930442P07Rik | 17 | 1656 | unclassified gene | RIKEN cDNA 4930442P07 gene | ||
Tssr143316 | 17 | 5 | + | TSS region | transcription start site region 143316 | |
Tssr143317 | 17 | 5 | + | TSS region | transcription start site region 143317 | |
Tssr143318 | 17 | 12 | + | TSS region | transcription start site region 143318 | |
Mir7216 | 17 | 75 | + | miRNA gene | microRNA 7216 | |
Tssr143319 | 17 | 17 | + | TSS region | transcription start site region 143319 | |
Gm49795 | 17 | 807 | - | lincRNA gene | predicted gene, 49795 | |
Gm49794 | 17 | 13381 | + | lincRNA gene | predicted gene, 49794 | |
Tssr5051 | 17 | 3 | + | TSS region | transcription start site region 5051 | |
Mir7217 | 17 | 61 | + | miRNA gene | microRNA 7217 | |
Mir7218 | 17 | 58 | + | miRNA gene | microRNA 7218 | |
Tssr147021 | 17 | 17 | - | TSS region | transcription start site region 147021 | |
Gm35007 | 17 | 1854 | - | lncRNA gene | predicted gene, 35007 | |
Tssr143320 | 17 | 48 | + | TSS region | transcription start site region 143320 | |
Gm49796 | 17 | 1074 | + | lincRNA gene | predicted gene, 49796 | |
Tssr143321 | 17 | 3 | + | TSS region | transcription start site region 143321 | |
Grm4 | 17 | 91291 | - | protein coding gene | glutamate receptor, metabotropic 4 | |
Tssr147022 | 17 | 33 | - | TSS region | transcription start site region 147022 | |
Tssr147023 | 17 | 7 | - | TSS region | transcription start site region 147023 | |
Tssr147024 | 17 | 11 | - | TSS region | transcription start site region 147024 | |
Tssr147025 | 17 | 11 | - | TSS region | transcription start site region 147025 | |
Tssr147026 | 17 | 43 | - | TSS region | transcription start site region 147026 | |
Cpgi8840 | 17 | 822 | CpG island | CpG island 8840 | ||
Tssr147027 | 17 | 5 | - | TSS region | transcription start site region 147027 | |
Tssr147028 | 17 | 13 | - | TSS region | transcription start site region 147028 | |
Tssr147029 | 17 | 9 | - | TSS region | transcription start site region 147029 | |
Tssr147030 | 17 | 18 | - | TSS region | transcription start site region 147030 | |
Tssr147031 | 17 | 10 | - | TSS region | transcription start site region 147031 | |
Tssr147032 | 17 | 8 | - | TSS region | transcription start site region 147032 | |
Tssr147033 | 17 | 13 | - | TSS region | transcription start site region 147033 | |
Gm49789 | 17 | 498 | + | unclassified gene | predicted gene, 49789 | |
Tssr5052 | 17 | 34 | - | TSS region | transcription start site region 5052 | |
Tssr147034 | 17 | 49 | - | TSS region | transcription start site region 147034 | |
Tssr147035 | 17 | 11 | - | TSS region | transcription start site region 147035 | |
Tssr147036 | 17 | 10 | - | TSS region | transcription start site region 147036 | |
Tssr147037 | 17 | 25 | - | TSS region | transcription start site region 147037 | |
Tssr147038 | 17 | 20 | - | TSS region | transcription start site region 147038 | |
Gm49790 | 17 | 397 | - | unclassified gene | predicted gene, 49790 | |
Tssr147039 | 17 | 5 | - | TSS region | transcription start site region 147039 | |
Modc1 | 17 | 17814910 | QTL | modifier of Odc1 | ||
D17Mit30 | 17 | 147 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 30 | ||
Lmr7 | 17 | -22692488 | QTL | leishmaniasis resistance 7 | ||
Cpgi8841 | 17 | 412 | CpG island | CpG island 8841 | ||
Cpgi8842 | 17 | 2651 | CpG island | CpG island 8842 | ||
Tssr147040 | 17 | 5 | - | TSS region | transcription start site region 147040 | |
Tssr147041 | 17 | 18 | - | TSS region | transcription start site region 147041 | |
Cpgi8843 | 17 | 491 | CpG island | CpG island 8843 | ||
Gm16005 | 17 | 271 | + | pseudogene | predicted gene 16005 | |
Tssr143322 | 17 | 5 | + | TSS region | transcription start site region 143322 | |
Gm9703 | 17 | 345 | + | pseudogene | predicted gene 9703 | |
Tssr5053 | 17 | 1 | + | TSS region | transcription start site region 5053 | |
Gm49774 | 17 | 10811 | - | antisense lncRNA gene | predicted gene, 49774 | |
Tssr147042 | 17 | 7 | - | TSS region | transcription start site region 147042 | |
Tssr147043 | 17 | 11 | - | TSS region | transcription start site region 147043 | |
Gm49773 | 17 | 351 | + | unclassified gene | predicted gene, 49773 | |
Tssr143323 | 17 | 46 | + | TSS region | transcription start site region 143323 | |
Cpgi8844 | 17 | 3093 | CpG island | CpG island 8844 | ||
Tssr143324 | 17 | 9 | + | TSS region | transcription start site region 143324 | |
Tssr143325 | 17 | 45 | + | TSS region | transcription start site region 143325 | |
Tssr143326 | 17 | 11 | + | TSS region | transcription start site region 143326 | |
Tssr143327 | 17 | 18 | + | TSS region | transcription start site region 143327 | |
Tssr143328 | 17 | 14 | + | TSS region | transcription start site region 143328 | |
Tssr147044 | 17 | 6 | - | TSS region | transcription start site region 147044 | |
Hmga1 | 17 | 7098 | + | protein coding gene | high mobility group AT-hook 1 | |
Tssr143329 | 17 | 13 | + | TSS region | transcription start site region 143329 | |
Tssr143330 | 17 | 11 | + | TSS region | transcription start site region 143330 | |
Tssr143331 | 17 | 22 | + | TSS region | transcription start site region 143331 | |
Tssr143332 | 17 | 9 | + | TSS region | transcription start site region 143332 | |
Tssr143333 | 17 | 13 | + | TSS region | transcription start site region 143333 | |
Tssr143334 | 17 | 11 | + | TSS region | transcription start site region 143334 | |
Tssr143335 | 17 | 18 | + | TSS region | transcription start site region 143335 | |
Tssr143336 | 17 | 13 | + | TSS region | transcription start site region 143336 | |
Tssr143337 | 17 | 15 | + | TSS region | transcription start site region 143337 | |
Tssr143338 | 17 | 12 | + | TSS region | transcription start site region 143338 | |
Tssr143339 | 17 | 12 | + | TSS region | transcription start site region 143339 | |
Tssr143340 | 17 | 21 | + | TSS region | transcription start site region 143340 | |
Tssr143341 | 17 | 12 | + | TSS region | transcription start site region 143341 | |
Tssr143342 | 17 | 46 | + | TSS region | transcription start site region 143342 | |
Tssr143343 | 17 | 17 | + | TSS region | transcription start site region 143343 | |
Tssr143344 | 17 | 9 | + | TSS region | transcription start site region 143344 | |
Tssr143345 | 17 | 7 | + | TSS region | transcription start site region 143345 | |
Tssr143346 | 17 | 7 | + | TSS region | transcription start site region 143346 | |
Tssr143347 | 17 | 14 | + | TSS region | transcription start site region 143347 | |
AI413582 | 17 | 1967 | - | protein coding gene | expressed sequence AI413582 | |
Cpgi8845 | 17 | 1146 | CpG island | CpG island 8845 | ||
C130040N14Rik | 17 | 1108 | + | antisense lncRNA gene | RIKEN cDNA C130040N14 gene | |
Tssr147045 | 17 | 79 | - | TSS region | transcription start site region 147045 | |
Nudt3 | 17 | 44070 | - | protein coding gene | nudix (nucleotide diphosphate linked moiety X)-type motif 3 | |
Tssr147046 | 17 | 3 | - | TSS region | transcription start site region 147046 | |
Tssr147047 | 17 | 2 | - | TSS region | transcription start site region 147047 | |
Tssr147048 | 17 | 12 | - | TSS region | transcription start site region 147048 | |
Gm49804 | 17 | 54442 | - | protein coding gene | predicted gene, 49804 | |
Tssr147049 | 17 | 37 | - | TSS region | transcription start site region 147049 | |
Tssr147050 | 17 | 8 | - | TSS region | transcription start site region 147050 | |
Tssr147051 | 17 | 20 | - | TSS region | transcription start site region 147051 | |
Tssr147052 | 17 | 29 | - | TSS region | transcription start site region 147052 | |
Tssr143348 | 17 | 11 | + | TSS region | transcription start site region 143348 | |
Cpgi8846 | 17 | 1359 | CpG island | CpG island 8846 | ||
Tssr147053 | 17 | 69 | - | TSS region | transcription start site region 147053 | |
Tssr147054 | 17 | 9 | - | TSS region | transcription start site region 147054 | |
Tssr147055 | 17 | 11 | - | TSS region | transcription start site region 147055 | |
Tssr147056 | 17 | 25 | - | TSS region | transcription start site region 147056 | |
Tssr147057 | 17 | 54 | - | TSS region | transcription start site region 147057 | |
Gm49741 | 17 | 768 | + | bidirectional promoter lncRNA gene | predicted gene, 49741 | |
Tssr147058 | 17 | 28 | - | TSS region | transcription start site region 147058 | |
Tssr147059 | 17 | 27 | - | TSS region | transcription start site region 147059 | |
Tssr147060 | 17 | 11 | - | TSS region | transcription start site region 147060 | |
Rps10 | 17 | 5061 | - | protein coding gene | ribosomal protein S10 | |
Cpgi8847 | 17 | 901 | CpG island | CpG island 8847 | ||
Tssr147061 | 17 | 29 | - | TSS region | transcription start site region 147061 | |
Gm15420 | 17 | 1525 | + | antisense lncRNA gene | predicted gene 15420 | |
Cpgi8848 | 17 | 374 | CpG island | CpG island 8848 | ||
Cpgi8849 | 17 | 190 | CpG island | CpG island 8849 | ||
Cpgi8850 | 17 | 1376 | CpG island | CpG island 8850 | ||
Tssr143349 | 17 | 11 | + | TSS region | transcription start site region 143349 | |
Tssr143350 | 17 | 23 | + | TSS region | transcription start site region 143350 | |
Tssr143351 | 17 | 50 | + | TSS region | transcription start site region 143351 | |
Pacsin1 | 17 | 55527 | + | protein coding gene | protein kinase C and casein kinase substrate in neurons 1 | |
Tssr143352 | 17 | 3 | + | TSS region | transcription start site region 143352 | |
Tssr143353 | 17 | 4 | + | TSS region | transcription start site region 143353 | |
Asbb3 | 17 | 100 | QTL | autoimmune susceptibility in C57BL/6J and BALB/c 3 | ||
D17Mit198 | 17 | 100 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 198 | ||
Tir9 | 17 | 15915078 | QTL | trypanosome infection response 9 | ||
D17Dcr1 | 17 | 104 | DNA segment | DNA Segment, Chr 17, Derry C. Roopenian 1 | ||
Cpgi8851 | 17 | 1085 | CpG island | CpG island 8851 | ||
Tssr143354 | 17 | 15 | + | TSS region | transcription start site region 143354 | |
Tssr143355 | 17 | 9 | + | TSS region | transcription start site region 143355 | |
Cpgi8852 | 17 | 199 | CpG island | CpG island 8852 | ||
Tssr143356 | 17 | 3 | + | TSS region | transcription start site region 143356 | |
Cpgi8853 | 17 | 262 | CpG island | CpG island 8853 | ||
Tssr143357 | 17 | 26 | + | TSS region | transcription start site region 143357 | |
Tssr143358 | 17 | 15 | + | TSS region | transcription start site region 143358 | |
Tssr143359 | 17 | 5 | + | TSS region | transcription start site region 143359 | |
Cpgi8854 | 17 | 157 | CpG island | CpG island 8854 | ||
Spdef | 17 | 14603 | - | protein coding gene | SAM pointed domain containing ets transcription factor | |
Cpgi8855 | 17 | 375 | CpG island | CpG island 8855 | ||
Tssr147062 | 17 | 19 | - | TSS region | transcription start site region 147062 | |
Tssr147063 | 17 | 12 | - | TSS region | transcription start site region 147063 | |
Gm15458 | 17 | 6272 | + | lincRNA gene | predicted gene 15458 | |
Ilrun | 17 | 69310 | - | protein coding gene | inflammation and lipid regulator with UBA-like and NBR1-like domains | |
Tssr147064 | 17 | 50 | - | TSS region | transcription start site region 147064 | |
Tssr147065 | 17 | 11 | - | TSS region | transcription start site region 147065 | |
Rps2-ps9 | 17 | 867 | + | pseudogene | ribosomal protein S2, pseudogene 9 | |
Tssr147066 | 17 | 2 | - | TSS region | transcription start site region 147066 |