Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:26935987-27005994

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phf1 17 26933127 to 26937890 4763 + protein coding gene PHD finger protein 1
Tssr143278 17 26937971 to 26937979 8 + TSS region transcription start site region 143278
Cuta 17 26937973 to 26939478 1505 - protein coding gene cutA divalent cation tolerance homolog
Cpgi8826 17 26938728 to 26940260 1532 CpG island CpG island 8826
Tssr146975 17 26938804 to 26938816 12 - TSS region transcription start site region 146975
Tssr146976 17 26939083 to 26939108 25 - TSS region transcription start site region 146976
Tssr146977 17 26939198 to 26939213 15 - TSS region transcription start site region 146977
Tssr146978 17 26939244 to 26939258 14 - TSS region transcription start site region 146978
Tssr146979 17 26939263 to 26939307 44 - TSS region transcription start site region 146979
Tssr146980 17 26939371 to 26939397 26 - TSS region transcription start site region 146980
Tssr146981 17 26939413 to 26939427 14 - TSS region transcription start site region 146981
Tssr146982 17 26939439 to 26939463 24 - TSS region transcription start site region 146982
Tssr146983 17 26939464 to 26939525 61 - TSS region transcription start site region 146983
Tssr146984 17 26939543 to 26939554 11 - TSS region transcription start site region 146984
Tssr143279 17 26941230 to 26941270 40 + TSS region transcription start site region 143279
Tssr143280 17 26941277 to 26941316 39 + TSS region transcription start site region 143280
Syngap1 17 26941408 to 26972434 31026 + protein coding gene synaptic Ras GTPase activating protein 1 homolog (rat)
Tssr143281 17 26941420 to 26941464 44 + TSS region transcription start site region 143281
Cpgi8827 17 26946359 to 26947175 816 CpG island CpG island 8827
Mir3083 17 26948056 to 26948119 63 - miRNA gene microRNA 3083
Cpgi8828 17 26948312 to 26949568 1256 CpG island CpG island 8828
Tssr143282 17 26948401 to 26948428 27 + TSS region transcription start site region 143282
Tssr143283 17 26948616 to 26948640 24 + TSS region transcription start site region 143283
Tssr143284 17 26948646 to 26948686 40 + TSS region transcription start site region 143284
Tssr143285 17 26948921 to 26948978 57 + TSS region transcription start site region 143285
Tssr143286 17 26951657 to 26951684 27 + TSS region transcription start site region 143286
Tssr143287 17 26951703 to 26951720 17 + TSS region transcription start site region 143287
Tssr143288 17 26952837 to 26952854 17 + TSS region transcription start site region 143288
Tssr143289 17 26952861 to 26952878 17 + TSS region transcription start site region 143289
Tssr146985 17 26956911 to 26956929 18 - TSS region transcription start site region 146985
Tssr143290 17 26970987 to 26970994 7 + TSS region transcription start site region 143290
Tssr143291 17 26971798 to 26971823 25 + TSS region transcription start site region 143291
Tssr143292 17 26971975 to 26971978 3 + TSS region transcription start site region 143292
Tssr143293 17 26972251 to 26972266 15 + TSS region transcription start site region 143293
Tssr143294 17 26972372 to 26972381 9 + TSS region transcription start site region 143294
Cpgi8829 17 26972536 to 26973922 1386 CpG island CpG island 8829
Tssr146986 17 26973027 to 26973052 25 - TSS region transcription start site region 146986
Tssr143295 17 26973161 to 26973219 58 + TSS region transcription start site region 143295
Zbtb9 17 26973179 to 26976203 3024 + protein coding gene zinc finger and BTB domain containing 9
Tssr143296 17 26998041 to 26998050 9 + TSS region transcription start site region 143296