Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Del(17D17Jcs41-D17Jcs15)8Jcs | 17 | 2002989 | chromosomal deletion | deletion, Chr 17, John C Schimenti 8 | ||
Cpgi8815 | 17 | 1414 | CpG island | CpG island 8815 | ||
Crebrf | 17 | 60985 | + | protein coding gene | CREB3 regulatory factor | |
D17Mit80 | 17 | 144 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 80 | ||
Tssr143269 | 17 | 46 | + | TSS region | transcription start site region 143269 | |
Cpgi8816 | 17 | 546 | CpG island | CpG island 8816 | ||
Tssr143270 | 17 | 34 | + | TSS region | transcription start site region 143270 | |
Bnip1 | 17 | 11442 | + | protein coding gene | BCL2/adenovirus E1B interacting protein 1 | |
Cpgi8817 | 17 | 379 | CpG island | CpG island 8817 | ||
Cpgi8818 | 17 | 1464 | CpG island | CpG island 8818 | ||
Nkx2-5 | 17 | 2901 | - | protein coding gene | NK2 homeobox 5 | |
Cpgi8819 | 17 | 566 | CpG island | CpG island 8819 | ||
Tssr146969 | 17 | 7 | - | TSS region | transcription start site region 146969 | |
Tssr146970 | 17 | 33 | - | TSS region | transcription start site region 146970 | |
Tssr146971 | 17 | 9 | - | TSS region | transcription start site region 146971 | |
Tssr146972 | 17 | 5 | - | TSS region | transcription start site region 146972 | |
Tssr146973 | 17 | 15 | - | TSS region | transcription start site region 146973 | |
Cpgi8820 | 17 | 575 | CpG island | CpG island 8820 | ||
Cpgi8821 | 17 | 1574 | CpG island | CpG island 8821 | ||
Tssr143271 | 17 | 21 | + | TSS region | transcription start site region 143271 | |
Gm17382 | 17 | 25888 | - | lincRNA gene | predicted gene, 17382 | |
Gm20468 | 17 | 36443 | + | lincRNA gene | predicted gene 20468 | |
D17Jcs54 | 17 | 212 | DNA segment | DNA segment, Chr 17, John C. Schimenti 54 | ||
Gm29819 | 17 | 458 | - | pseudogene | predicted gene, 29819 | |
Cpgi8822 | 17 | 201 | CpG island | CpG island 8822 | ||
Tssr143272 | 17 | 28 | + | TSS region | transcription start site region 143272 | |
Cpgi8823 | 17 | 350 | CpG island | CpG island 8823 | ||
Tssr146974 | 17 | 13 | - | TSS region | transcription start site region 146974 | |
Gm41555 | 17 | 4328 | - | lncRNA gene | predicted gene, 41555 | |
D17Jcs124 | 17 | 185 | DNA segment | DNA segment, Chr 17, John C. Schimenti 124 | ||
Cpgi8824 | 17 | 1015 | CpG island | CpG island 8824 | ||
Kifc5b | 17 | 15488 | + | protein coding gene | kinesin family member C5B | |
Tssr143273 | 17 | 11 | + | TSS region | transcription start site region 143273 | |
Tssr143274 | 17 | 48 | + | TSS region | transcription start site region 143274 | |
Gm27775 | 17 | 57 | + | miRNA gene | predicted gene, 27775 | |
Cpgi8825 | 17 | 977 | CpG island | CpG island 8825 | ||
Tssr143275 | 17 | 17 | + | TSS region | transcription start site region 143275 | |
Tssr143276 | 17 | 88 | + | TSS region | transcription start site region 143276 | |
Phf1 | 17 | 4763 | + | protein coding gene | PHD finger protein 1 | |
Tssr143277 | 17 | 84 | + | TSS region | transcription start site region 143277 | |
Mir6968 | 17 | 67 | + | miRNA gene | microRNA 6968 | |
Tssr143278 | 17 | 8 | + | TSS region | transcription start site region 143278 | |
Cuta | 17 | 1505 | - | protein coding gene | cutA divalent cation tolerance homolog | |
Cpgi8826 | 17 | 1532 | CpG island | CpG island 8826 | ||
Tssr146975 | 17 | 12 | - | TSS region | transcription start site region 146975 | |
Tssr146976 | 17 | 25 | - | TSS region | transcription start site region 146976 | |
Tssr146977 | 17 | 15 | - | TSS region | transcription start site region 146977 | |
Tssr146978 | 17 | 14 | - | TSS region | transcription start site region 146978 | |
Tssr146979 | 17 | 44 | - | TSS region | transcription start site region 146979 | |
Tssr146980 | 17 | 26 | - | TSS region | transcription start site region 146980 | |
Tssr146981 | 17 | 14 | - | TSS region | transcription start site region 146981 | |
Tssr146982 | 17 | 24 | - | TSS region | transcription start site region 146982 | |
Tssr146983 | 17 | 61 | - | TSS region | transcription start site region 146983 | |
Tssr146984 | 17 | 11 | - | TSS region | transcription start site region 146984 | |
Tssr143279 | 17 | 40 | + | TSS region | transcription start site region 143279 | |
Tssr143280 | 17 | 39 | + | TSS region | transcription start site region 143280 | |
Syngap1 | 17 | 31026 | + | protein coding gene | synaptic Ras GTPase activating protein 1 homolog (rat) | |
Tssr143281 | 17 | 44 | + | TSS region | transcription start site region 143281 | |
Cpgi8827 | 17 | 816 | CpG island | CpG island 8827 | ||
Mir3083 | 17 | 63 | - | miRNA gene | microRNA 3083 | |
Cpgi8828 | 17 | 1256 | CpG island | CpG island 8828 | ||
Tssr143282 | 17 | 27 | + | TSS region | transcription start site region 143282 | |
Tssr143283 | 17 | 24 | + | TSS region | transcription start site region 143283 | |
Tssr143284 | 17 | 40 | + | TSS region | transcription start site region 143284 | |
Tssr143285 | 17 | 57 | + | TSS region | transcription start site region 143285 | |
Tssr143286 | 17 | 27 | + | TSS region | transcription start site region 143286 | |
Tssr143287 | 17 | 17 | + | TSS region | transcription start site region 143287 | |
Tssr143288 | 17 | 17 | + | TSS region | transcription start site region 143288 | |
Tssr143289 | 17 | 17 | + | TSS region | transcription start site region 143289 | |
Tssr146985 | 17 | 18 | - | TSS region | transcription start site region 146985 | |
Tssr143290 | 17 | 7 | + | TSS region | transcription start site region 143290 | |
Tssr143291 | 17 | 25 | + | TSS region | transcription start site region 143291 | |
Tssr143292 | 17 | 3 | + | TSS region | transcription start site region 143292 | |
Tssr143293 | 17 | 15 | + | TSS region | transcription start site region 143293 | |
Tssr143294 | 17 | 9 | + | TSS region | transcription start site region 143294 | |
Cpgi8829 | 17 | 1386 | CpG island | CpG island 8829 | ||
Tssr146986 | 17 | 25 | - | TSS region | transcription start site region 146986 | |
Tssr143295 | 17 | 58 | + | TSS region | transcription start site region 143295 | |
Zbtb9 | 17 | 3024 | + | protein coding gene | zinc finger and BTB domain containing 9 | |
Tssr143296 | 17 | 9 | + | TSS region | transcription start site region 143296 | |
Cpgi8830 | 17 | 376 | CpG island | CpG island 8830 | ||
Tssr143297 | 17 | 11 | + | TSS region | transcription start site region 143297 | |
Tssr143298 | 17 | 62 | + | TSS region | transcription start site region 143298 | |
Ggnbp1 | 17 | 18343 | + | protein coding gene | gametogenetin binding protein 1 | |
Bak1 | 17 | 9027 | - | protein coding gene | BCL2-antagonist/killer 1 | |
Tssr146987 | 17 | 20 | - | TSS region | transcription start site region 146987 | |
Tssr146988 | 17 | 27 | - | TSS region | transcription start site region 146988 | |
Tssr146989 | 17 | 41 | - | TSS region | transcription start site region 146989 | |
Tssr146990 | 17 | 37 | - | TSS region | transcription start site region 146990 | |
Tssr146991 | 17 | 32 | - | TSS region | transcription start site region 146991 | |
D17Jcs15 | 17 | 239 | DNA segment | DNA segment, Chr 17, John C. Schimenti 15 | ||
Cpgi8831 | 17 | 277 | CpG island | CpG island 8831 | ||
Tssr146992 | 17 | 11 | - | TSS region | transcription start site region 146992 | |
Tssr146993 | 17 | 72 | - | TSS region | transcription start site region 146993 | |
Tssr146994 | 17 | 5 | - | TSS region | transcription start site region 146994 | |
Tssr146995 | 17 | 11 | - | TSS region | transcription start site region 146995 | |
Tssr146996 | 17 | 17 | - | TSS region | transcription start site region 146996 | |
Tssr143299 | 17 | 4 | + | TSS region | transcription start site region 143299 | |
Tssr143300 | 17 | 46 | + | TSS region | transcription start site region 143300 | |
Tssr143301 | 17 | 6 | + | TSS region | transcription start site region 143301 | |
Cpgi8832 | 17 | 230 | CpG island | CpG island 8832 | ||
Tssr143302 | 17 | 17 | + | TSS region | transcription start site region 143302 | |
Tssr143303 | 17 | 2 | + | TSS region | transcription start site region 143303 | |
Tssr146997 | 17 | 9 | - | TSS region | transcription start site region 146997 | |
Tssr143304 | 17 | 11 | + | TSS region | transcription start site region 143304 | |
Tssr146998 | 17 | 23 | - | TSS region | transcription start site region 146998 | |
Tssr146999 | 17 | 11 | - | TSS region | transcription start site region 146999 | |
Tssr147000 | 17 | 17 | - | TSS region | transcription start site region 147000 | |
Cpgi8833 | 17 | 1149 | CpG island | CpG island 8833 | ||
Tssr147001 | 17 | 14 | - | TSS region | transcription start site region 147001 | |
Tssr143305 | 17 | 46 | + | TSS region | transcription start site region 143305 | |
Itpr3 | 17 | 64919 | + | protein coding gene | inositol 1,4,5-triphosphate receptor 3 | |
Tssr143306 | 17 | 16 | + | TSS region | transcription start site region 143306 | |
Tssr143307 | 17 | 9 | + | TSS region | transcription start site region 143307 | |
Tssr143308 | 17 | 11 | + | TSS region | transcription start site region 143308 | |
Tssr143309 | 17 | 7 | + | TSS region | transcription start site region 143309 | |
Mir7677 | 17 | 66 | + | miRNA gene | microRNA 7677 | |
Itpr3os | 17 | 1782 | - | antisense lncRNA gene | inositol 1,4,5-triphosphate receptor 3, opposite strand | |
Tssr147002 | 17 | 25 | - | TSS region | transcription start site region 147002 | |
Tssr143310 | 17 | 29 | + | TSS region | transcription start site region 143310 | |
Tssr143311 | 17 | 14 | + | TSS region | transcription start site region 143311 | |
Cpgi8834 | 17 | 192 | CpG island | CpG island 8834 | ||
Cpgi8835 | 17 | 211 | CpG island | CpG island 8835 | ||
Tssr143312 | 17 | 4 | + | TSS region | transcription start site region 143312 | |
Uqcc2 | 17 | 11226 | - | protein coding gene | ubiquinol-cytochrome c reductase complex assembly factor 2 | |
Cpgi8836 | 17 | 168 | CpG island | CpG island 8836 | ||
Cpgi8837 | 17 | 724 | CpG island | CpG island 8837 | ||
Tssr147003 | 17 | 11 | - | TSS region | transcription start site region 147003 | |
Tssr147004 | 17 | 22 | - | TSS region | transcription start site region 147004 | |
Tssr147005 | 17 | 15 | - | TSS region | transcription start site region 147005 | |
Tssr147006 | 17 | 18 | - | TSS region | transcription start site region 147006 | |
Tssr147007 | 17 | 18 | - | TSS region | transcription start site region 147007 | |
Ip6k3 | 17 | 23793 | - | protein coding gene | inositol hexaphosphate kinase 3 | |
Tssr147008 | 17 | 31 | - | TSS region | transcription start site region 147008 | |
Tssr147009 | 17 | 9 | - | TSS region | transcription start site region 147009 | |
Tssr147010 | 17 | 18 | - | TSS region | transcription start site region 147010 | |
Tssr147011 | 17 | 12 | - | TSS region | transcription start site region 147011 | |
Lemd2 | 17 | 14837 | - | protein coding gene | LEM domain containing 2 | |
Gm26724 | 17 | 2039 | + | lincRNA gene | predicted gene, 26724 | |
Tssr147012 | 17 | 1 | - | TSS region | transcription start site region 147012 | |
Cpgi8838 | 17 | 1678 | CpG island | CpG island 8838 | ||
Tssr143313 | 17 | 17 | + | TSS region | transcription start site region 143313 | |
Tssr143314 | 17 | 5 | + | TSS region | transcription start site region 143314 | |
Tssr147013 | 17 | 90 | - | TSS region | transcription start site region 147013 | |
Tssr147014 | 17 | 27 | - | TSS region | transcription start site region 147014 | |
Gm34736 | 17 | 9295 | + | lncRNA gene | predicted gene, 34736 | |
9630028I04Rik | 17 | 12991 | - | lncRNA gene | RIKEN cDNA 9630028I04 gene | |
Tssr147015 | 17 | 55 | - | TSS region | transcription start site region 147015 | |
Tssr147016 | 17 | 10 | - | TSS region | transcription start site region 147016 | |
Gm49793 | 17 | 10380 | - | lincRNA gene | predicted gene, 49793 | |
Mir7214 | 17 | 60 | - | miRNA gene | microRNA 7214 | |
Tssr147017 | 17 | 11 | - | TSS region | transcription start site region 147017 | |
Tssr147018 | 17 | 41 | - | TSS region | transcription start site region 147018 | |
4930556A12Rik | 17 | 1142 | unclassified gene | RIKEN cDNA 4930556A12 gene | ||
Tssr147019 | 17 | 11 | - | TSS region | transcription start site region 147019 | |
Gm10505 | 17 | 19798 | + | lincRNA gene | predicted gene 10505 | |
Tssr147020 | 17 | 8 | - | TSS region | transcription start site region 147020 | |
Cpgi8839 | 17 | 758 | CpG island | CpG island 8839 | ||
Tssr143315 | 17 | 4 | + | TSS region | transcription start site region 143315 | |
4930442P07Rik | 17 | 1656 | unclassified gene | RIKEN cDNA 4930442P07 gene | ||
Tssr143316 | 17 | 5 | + | TSS region | transcription start site region 143316 | |
Tssr143317 | 17 | 5 | + | TSS region | transcription start site region 143317 | |
Tssr143318 | 17 | 12 | + | TSS region | transcription start site region 143318 | |
Mir7216 | 17 | 75 | + | miRNA gene | microRNA 7216 | |
Tssr143319 | 17 | 17 | + | TSS region | transcription start site region 143319 | |
Gm49795 | 17 | 807 | - | lincRNA gene | predicted gene, 49795 | |
Gm49794 | 17 | 13381 | + | lincRNA gene | predicted gene, 49794 | |
Tssr5051 | 17 | 3 | + | TSS region | transcription start site region 5051 | |
Mir7217 | 17 | 61 | + | miRNA gene | microRNA 7217 | |
Mir7218 | 17 | 58 | + | miRNA gene | microRNA 7218 | |
Tssr147021 | 17 | 17 | - | TSS region | transcription start site region 147021 | |
Gm35007 | 17 | 1854 | - | lncRNA gene | predicted gene, 35007 | |
Tssr143320 | 17 | 48 | + | TSS region | transcription start site region 143320 | |
Gm49796 | 17 | 1074 | + | lincRNA gene | predicted gene, 49796 | |
Tssr143321 | 17 | 3 | + | TSS region | transcription start site region 143321 | |
Grm4 | 17 | 91291 | - | protein coding gene | glutamate receptor, metabotropic 4 | |
Tssr147022 | 17 | 33 | - | TSS region | transcription start site region 147022 | |
Tssr147023 | 17 | 7 | - | TSS region | transcription start site region 147023 | |
Tssr147024 | 17 | 11 | - | TSS region | transcription start site region 147024 | |
Tssr147025 | 17 | 11 | - | TSS region | transcription start site region 147025 | |
Tssr147026 | 17 | 43 | - | TSS region | transcription start site region 147026 | |
Cpgi8840 | 17 | 822 | CpG island | CpG island 8840 | ||
Tssr147027 | 17 | 5 | - | TSS region | transcription start site region 147027 | |
Tssr147028 | 17 | 13 | - | TSS region | transcription start site region 147028 | |
Tssr147029 | 17 | 9 | - | TSS region | transcription start site region 147029 | |
Tssr147030 | 17 | 18 | - | TSS region | transcription start site region 147030 | |
Tssr147031 | 17 | 10 | - | TSS region | transcription start site region 147031 | |
Tssr147032 | 17 | 8 | - | TSS region | transcription start site region 147032 | |
Tssr147033 | 17 | 13 | - | TSS region | transcription start site region 147033 | |
Gm49789 | 17 | 498 | + | unclassified gene | predicted gene, 49789 | |
Tssr5052 | 17 | 34 | - | TSS region | transcription start site region 5052 | |
Tssr147034 | 17 | 49 | - | TSS region | transcription start site region 147034 | |
Tssr147035 | 17 | 11 | - | TSS region | transcription start site region 147035 | |
Tssr147036 | 17 | 10 | - | TSS region | transcription start site region 147036 | |
Tssr147037 | 17 | 25 | - | TSS region | transcription start site region 147037 | |
Tssr147038 | 17 | 20 | - | TSS region | transcription start site region 147038 | |
Gm49790 | 17 | 397 | - | unclassified gene | predicted gene, 49790 | |
Tssr147039 | 17 | 5 | - | TSS region | transcription start site region 147039 | |
D17Mit30 | 17 | 147 | DNA segment | DNA segment, Chr 17, Massachusetts Institute of Technology 30 | ||
Modc1 | 17 | 17814910 | QTL | modifier of Odc1 |