Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:26590644-26840702

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ergic1 17 26561489 to 26656931 95442 + protein coding gene endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
Tssr143254 17 26602222 to 26602236 14 + TSS region transcription start site region 143254
Tssr143255 17 26602267 to 26602274 7 + TSS region transcription start site region 143255
Tssr143256 17 26607831 to 26607845 14 + TSS region transcription start site region 143256
Cfq12 17 26609807 to 30445981 3836174 QTL conditioned fear QTL 12
Gm17218 17 26620358 to 26625100 4742 - antisense lncRNA gene predicted gene 17218
Tssr143257 17 26621512 to 26621521 9 + TSS region transcription start site region 143257
Tssr143258 17 26624178 to 26624188 10 + TSS region transcription start site region 143258
Tssr143259 17 26624198 to 26624199 1 + TSS region transcription start site region 143259
Gm41553 17 26641711 to 26652856 11145 + lncRNA gene predicted gene, 41553
Tssr143260 17 26655919 to 26655955 36 + TSS region transcription start site region 143260
Cpgi8813 17 26662982 to 26663463 481 CpG island CpG island 8813
Tssr143261 17 26663197 to 26663212 15 + TSS region transcription start site region 143261
Cpgi8814 17 26675994 to 26676970 976 CpG island CpG island 8814
Tssr143262 17 26676387 to 26676388 1 + TSS region transcription start site region 143262
Tssr143263 17 26676390 to 26676401 11 + TSS region transcription start site region 143263
Atp6v0e 17 26676396 to 26699644 23248 + protein coding gene ATPase, H+ transporting, lysosomal V0 subunit E
Tssr143264 17 26676405 to 26676466 61 + TSS region transcription start site region 143264
Tssr143265 17 26682671 to 26682697 26 + TSS region transcription start site region 143265
Tssr143266 17 26699274 to 26699318 44 + TSS region transcription start site region 143266
Tssr143267 17 26699324 to 26699337 13 + TSS region transcription start site region 143267
Cpgi8815 17 26715337 to 26716751 1414 CpG island CpG island 8815
Tssr143268 17 26715644 to 26715702 58 + TSS region transcription start site region 143268
Crebrf 17 26715650 to 26776635 60985 + protein coding gene CREB3 regulatory factor
Tssr146968 17 26716222 to 26716260 38 - TSS region transcription start site region 146968
D17Mit80 17 26722888 to 26723032 144 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 80
Tssr143269 17 26766547 to 26766593 46 + TSS region transcription start site region 143269
Cpgi8816 17 26780912 to 26781458 546 CpG island CpG island 8816
Tssr143270 17 26781060 to 26781094 34 + TSS region transcription start site region 143270
Bnip1 17 26781079 to 26792521 11442 + protein coding gene BCL2/adenovirus E1B interacting protein 1
Cpgi8817 17 26837021 to 26837400 379 CpG island CpG island 8817
Cpgi8818 17 26838647 to 26840111 1464 CpG island CpG island 8818
Nkx2-5 17 26838664 to 26841565 2901 - protein coding gene NK2 homeobox 5