Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:26435331-26635357

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Neurl1b 17 26414965 to 26446349 31384 + protein coding gene neuralized E3 ubiquitin protein ligase 1B
Cpgi8809 17 26438264 to 26439423 1159 CpG island CpG island 8809
Tssr143228 17 26442153 to 26442156 3 + TSS region transcription start site region 143228
Tssr146935 17 26465098 to 26465135 37 - TSS region transcription start site region 146935
Gm34455 17 26467654 to 26503322 35668 - lncRNA gene predicted gene, 34455
Tssr146936 17 26490915 to 26490918 3 - TSS region transcription start site region 146936
D17Pri8 17 26496611 to 26497056 445 DNA segment DNA segment, Chr 17, Princeton University 8
Tssr146937 17 26503092 to 26503101 9 - TSS region transcription start site region 146937
Tssr143229 17 26503379 to 26503398 19 + TSS region transcription start site region 143229
Tssr146938 17 26504327 to 26504340 13 - TSS region transcription start site region 146938
Dusp1 17 26505591 to 26508472 2881 - protein coding gene dual specificity phosphatase 1
Tssr146939 17 26505955 to 26505967 12 - TSS region transcription start site region 146939
Tssr146940 17 26505986 to 26505997 11 - TSS region transcription start site region 146940
Tssr146941 17 26506144 to 26506166 22 - TSS region transcription start site region 146941
Tssr146942 17 26506172 to 26506188 16 - TSS region transcription start site region 146942
Tssr146943 17 26506248 to 26506270 22 - TSS region transcription start site region 146943
Tssr143230 17 26506253 to 26506371 118 + TSS region transcription start site region 143230
Tssr146944 17 26506378 to 26506395 17 - TSS region transcription start site region 146944
Tssr146945 17 26506438 to 26506458 20 - TSS region transcription start site region 146945
Tssr146946 17 26506502 to 26506516 14 - TSS region transcription start site region 146946
Tssr146947 17 26506526 to 26506537 11 - TSS region transcription start site region 146947
Tssr146948 17 26506543 to 26506563 20 - TSS region transcription start site region 146948
Tssr146949 17 26506610 to 26506631 21 - TSS region transcription start site region 146949
Cpgi8810 17 26507105 to 26507350 245 CpG island CpG island 8810
Tssr146950 17 26507153 to 26507172 19 - TSS region transcription start site region 146950
Tssr143231 17 26507494 to 26507501 7 + TSS region transcription start site region 143231
Cpgi8811 17 26507570 to 26509023 1453 CpG island CpG island 8811
Tssr146951 17 26507628 to 26507659 31 - TSS region transcription start site region 146951
Tssr146952 17 26508189 to 26508207 18 - TSS region transcription start site region 146952
Tssr146953 17 26508214 to 26508247 33 - TSS region transcription start site region 146953
Tssr146954 17 26508463 to 26508482 19 - TSS region transcription start site region 146954
Tssr143232 17 26508648 to 26508680 32 + TSS region transcription start site region 143232
Tssr143233 17 26508697 to 26508731 34 + TSS region transcription start site region 143233
Tssr143234 17 26508749 to 26508774 25 + TSS region transcription start site region 143234
Tssr146955 17 26508864 to 26508882 18 - TSS region transcription start site region 146955
Tssr5044 17 26508951 to 26508964 13 + TSS region transcription start site region 5044
Tssr5045 17 26509463 to 26509468 5 - TSS region transcription start site region 5045
Tssr146956 17 26509494 to 26509499 5 - TSS region transcription start site region 146956
Tssr5046 17 26509516 to 26509521 5 - TSS region transcription start site region 5046
Tssr5047 17 26509525 to 26509532 7 - TSS region transcription start site region 5047
Tssr146957 17 26509559 to 26509569 10 - TSS region transcription start site region 146957
Tssr143235 17 26509701 to 26509708 7 + TSS region transcription start site region 143235
Tssr143236 17 26509726 to 26509741 15 + TSS region transcription start site region 143236
Tssr143237 17 26512727 to 26512760 33 + TSS region transcription start site region 143237
Tssr146958 17 26514760 to 26514765 5 - TSS region transcription start site region 146958
Tssr143238 17 26514926 to 26514952 26 + TSS region transcription start site region 143238
D17Lon7 17 26526025 to 26526242 217 DNA segment DNA segment, Chr 17, London 7
Tssr146959 17 26531682 to 26531697 15 - TSS region transcription start site region 146959
Tssr143239 17 26531808 to 26531839 31 + TSS region transcription start site region 143239
Tssr146960 17 26532614 to 26532617 3 - TSS region transcription start site region 146960
Tssr146961 17 26532637 to 26532647 10 - TSS region transcription start site region 146961
Tssr146962 17 26532665 to 26532676 11 - TSS region transcription start site region 146962
Tssr146963 17 26532710 to 26532723 13 - TSS region transcription start site region 146963
Tssr143240 17 26532879 to 26532886 7 + TSS region transcription start site region 143240
Tssr143241 17 26532895 to 26532900 5 + TSS region transcription start site region 143241
Tssr143242 17 26532909 to 26532930 21 + TSS region transcription start site region 143242
Tssr143243 17 26532934 to 26532955 21 + TSS region transcription start site region 143243
Tssr143244 17 26532965 to 26532972 7 + TSS region transcription start site region 143244
Tssr143245 17 26534125 to 26534173 48 + TSS region transcription start site region 143245
Gm34606 17 26534926 to 26535422 496 + lncRNA gene predicted gene, 34606
Tssr5048 17 26535331 to 26535357 26 + TSS region transcription start site region 5048
Tssr5049 17 26535398 to 26535408 10 - TSS region transcription start site region 5049
Tssr5050 17 26535829 to 26535836 7 + TSS region transcription start site region 5050
Tssr143246 17 26538330 to 26538352 22 + TSS region transcription start site region 143246
Gm8225 17 26542760 to 26543715 955 + pseudogene predicted gene 8225
Tssr143247 17 26551440 to 26551476 36 + TSS region transcription start site region 143247
1700049J03Rik 17 26554254 to 26561499 7245 - antisense lncRNA gene RIKEN cDNA 1700049J03 gene
Tssr143248 17 26560718 to 26560742 24 + TSS region transcription start site region 143248
Cpgi8812 17 26561222 to 26562051 829 CpG island CpG island 8812
Tssr146964 17 26561365 to 26561386 21 - TSS region transcription start site region 146964
Tssr143249 17 26561461 to 26561474 13 + TSS region transcription start site region 143249
Tssr143250 17 26561479 to 26561505 26 + TSS region transcription start site region 143250
Ergic1 17 26561489 to 26656931 95442 + protein coding gene endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
Tssr143251 17 26561515 to 26561592 77 + TSS region transcription start site region 143251
Tssr146965 17 26570713 to 26570750 37 - TSS region transcription start site region 146965
Tssr146966 17 26570803 to 26570846 43 - TSS region transcription start site region 146966
Tssr143252 17 26571102 to 26571124 22 + TSS region transcription start site region 143252
Tssr143253 17 26571166 to 26571173 7 + TSS region transcription start site region 143253
Tssr146967 17 26572242 to 26572258 16 - TSS region transcription start site region 146967
Gm22420 17 26580802 to 26580927 125 - miRNA gene predicted gene, 22420
Tssr143254 17 26602222 to 26602236 14 + TSS region transcription start site region 143254
Tssr143255 17 26602267 to 26602274 7 + TSS region transcription start site region 143255
Tssr143256 17 26607831 to 26607845 14 + TSS region transcription start site region 143256
Cfq12 17 26609807 to 30445981 3836174 QTL conditioned fear QTL 12
Gm17218 17 26620358 to 26625100 4742 - antisense lncRNA gene predicted gene 17218
Tssr143257 17 26621512 to 26621521 9 + TSS region transcription start site region 143257
Tssr143258 17 26624178 to 26624188 10 + TSS region transcription start site region 143258
Tssr143259 17 26624198 to 26624199 1 + TSS region transcription start site region 143259