Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:26187700-26318726

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Axin1 17 26138688 to 26195811 57123 + protein coding gene axin 1
Pdia2 17 26195999 to 26199087 3088 - protein coding gene protein disulfide isomerase associated 2
Tssr146920 17 26199030 to 26199045 15 - TSS region transcription start site region 146920
Arhgdig 17 26199183 to 26201350 2167 - protein coding gene Rho GDP dissociation inhibitor (GDI) gamma
Cpgi8802 17 26200338 to 26202031 1693 CpG island CpG island 8802
Tssr146921 17 26201189 to 26201227 38 - TSS region transcription start site region 146921
Tssr146922 17 26201305 to 26201312 7 - TSS region transcription start site region 146922
Tssr146923 17 26201328 to 26201350 22 - TSS region transcription start site region 146923
Tssr146924 17 26201363 to 26201387 24 - TSS region transcription start site region 146924
Tssr146925 17 26201448 to 26201492 44 - TSS region transcription start site region 146925
Cpgi8803 17 26202850 to 26203964 1114 CpG island CpG island 8803
Tssr143215 17 26202946 to 26203016 70 + TSS region transcription start site region 143215
Rgs11 17 26202951 to 26211324 8373 + protein coding gene regulator of G-protein signaling 11
Tssr143216 17 26203815 to 26203826 11 + TSS region transcription start site region 143216
Tssr143217 17 26204317 to 26204330 13 + TSS region transcription start site region 143217
Tssr146926 17 26206424 to 26206434 10 - TSS region transcription start site region 146926
Tssr146927 17 26206444 to 26206453 9 - TSS region transcription start site region 146927
Tssr146928 17 26206457 to 26206466 9 - TSS region transcription start site region 146928
Tssr146929 17 26206487 to 26206498 11 - TSS region transcription start site region 146929
Cpgi8804 17 26208128 to 26208336 208 CpG island CpG island 8804
Fam234a 17 26212692 to 26244245 31553 - protein coding gene family with sequence similarity 234, member A
Gm23123 17 26223502 to 26223645 143 + snoRNA gene predicted gene, 23123
Gm3946 17 26223711 to 26224554 843 + pseudogene predicted gene 3946
Gm20026 17 26232564 to 26232881 317 + pseudogene predicted gene, 20026
Cpgi8805 17 26243662 to 26244435 773 CpG island CpG island 8805
Tssr146930 17 26244118 to 26244177 59 - TSS region transcription start site region 146930
Tssr146931 17 26244190 to 26244199 9 - TSS region transcription start site region 146931
Tssr146932 17 26244203 to 26244228 25 - TSS region transcription start site region 146932
Gm50007 17 26251350 to 26251445 95 - pseudogene predicted gene, 50007
Cpgi8806 17 26252700 to 26253726 1026 CpG island CpG island 8806
Tssr146933 17 26252855 to 26252875 20 - TSS region transcription start site region 146933
Luc7l 17 26252896 to 26285504 32608 + protein coding gene Luc7-like
Tssr143218 17 26252903 to 26252914 11 + TSS region transcription start site region 143218
Tssr143219 17 26252915 to 26252983 68 + TSS region transcription start site region 143219
Tssr143220 17 26252987 to 26252996 9 + TSS region transcription start site region 143220
D17Mit174 17 26258644 to 26258777 133 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 174
D17Mit173 17 26258655 to 26258777 122 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 173
Gm50013 17 26267395 to 26274744 7349 - antisense lncRNA gene predicted gene, 50013
Gm16580 17 26269337 to 26270381 1044 + pseudogene predicted gene 16580
Tssr143221 17 26270260 to 26270292 32 + TSS region transcription start site region 143221
Tssr143222 17 26270352 to 26270386 34 + TSS region transcription start site region 143222
Tssr143223 17 26270390 to 26270402 12 + TSS region transcription start site region 143223
Tssr143224 17 26272956 to 26272962 6 + TSS region transcription start site region 143224
Tssr143225 17 26275795 to 26275799 4 + TSS region transcription start site region 143225
Eye2 17 26286363 to 40794146 14507783 QTL eye weight 2
Hba-ps4 17 26286363 to 26287061 698 - pseudogene hemoglobin alpha, pseudogene 4
Hst4 17 26286363 to 29495465 3209102 heritable phenotypic marker hybrid sterility 4
Tssr146934 17 26287058 to 26287065 7 - TSS region transcription start site region 146934
Gm50015 17 26317418 to 26322622 5204 - lincRNA gene predicted gene, 50015