Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:26160366-26560416

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124 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ceat1 17 12417795 to 26182159 13764364 QTL chronic experimental autoimmune thyroiditis 1
Axin1 17 26138688 to 26195811 57123 + protein coding gene axin 1
D17Mit100 17 26182038 to 26182159 121 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 100
Kcal2 17 26182038 to 52604676 26422638 QTL kilocalorie 2
Idd23 17 26182159 to 3924615 -22257544 QTL insulin dependent diabetes susceptibility 23
Pdia2 17 26195999 to 26199087 3088 - protein coding gene protein disulfide isomerase associated 2
Tssr146920 17 26199030 to 26199045 15 - TSS region transcription start site region 146920
Arhgdig 17 26199183 to 26201350 2167 - protein coding gene Rho GDP dissociation inhibitor (GDI) gamma
Cpgi8802 17 26200338 to 26202031 1693 CpG island CpG island 8802
Tssr146921 17 26201189 to 26201227 38 - TSS region transcription start site region 146921
Tssr146922 17 26201305 to 26201312 7 - TSS region transcription start site region 146922
Tssr146923 17 26201328 to 26201350 22 - TSS region transcription start site region 146923
Tssr146924 17 26201363 to 26201387 24 - TSS region transcription start site region 146924
Tssr146925 17 26201448 to 26201492 44 - TSS region transcription start site region 146925
Cpgi8803 17 26202850 to 26203964 1114 CpG island CpG island 8803
Tssr143215 17 26202946 to 26203016 70 + TSS region transcription start site region 143215
Rgs11 17 26202951 to 26211324 8373 + protein coding gene regulator of G-protein signaling 11
Tssr143216 17 26203815 to 26203826 11 + TSS region transcription start site region 143216
Tssr143217 17 26204317 to 26204330 13 + TSS region transcription start site region 143217
Tssr146926 17 26206424 to 26206434 10 - TSS region transcription start site region 146926
Tssr146927 17 26206444 to 26206453 9 - TSS region transcription start site region 146927
Tssr146928 17 26206457 to 26206466 9 - TSS region transcription start site region 146928
Tssr146929 17 26206487 to 26206498 11 - TSS region transcription start site region 146929
Cpgi8804 17 26208128 to 26208336 208 CpG island CpG island 8804
Fam234a 17 26212692 to 26244245 31553 - protein coding gene family with sequence similarity 234, member A
Gm23123 17 26223502 to 26223645 143 + snoRNA gene predicted gene, 23123
Gm3946 17 26223711 to 26224554 843 + pseudogene predicted gene 3946
Gm20026 17 26232564 to 26232881 317 + pseudogene predicted gene, 20026
Cpgi8805 17 26243662 to 26244435 773 CpG island CpG island 8805
Tssr146930 17 26244118 to 26244177 59 - TSS region transcription start site region 146930
Tssr146931 17 26244190 to 26244199 9 - TSS region transcription start site region 146931
Tssr146932 17 26244203 to 26244228 25 - TSS region transcription start site region 146932
Gm50007 17 26251350 to 26251445 95 - pseudogene predicted gene, 50007
Cpgi8806 17 26252700 to 26253726 1026 CpG island CpG island 8806
Tssr146933 17 26252855 to 26252875 20 - TSS region transcription start site region 146933
Luc7l 17 26252896 to 26285504 32608 + protein coding gene Luc7-like
Tssr143218 17 26252903 to 26252914 11 + TSS region transcription start site region 143218
Tssr143219 17 26252915 to 26252983 68 + TSS region transcription start site region 143219
Tssr143220 17 26252987 to 26252996 9 + TSS region transcription start site region 143220
D17Mit174 17 26258644 to 26258777 133 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 174
D17Mit173 17 26258655 to 26258777 122 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 173
Gm50013 17 26267395 to 26274744 7349 - antisense lncRNA gene predicted gene, 50013
Gm16580 17 26269337 to 26270381 1044 + pseudogene predicted gene 16580
Tssr143221 17 26270260 to 26270292 32 + TSS region transcription start site region 143221
Tssr143222 17 26270352 to 26270386 34 + TSS region transcription start site region 143222
Tssr143223 17 26270390 to 26270402 12 + TSS region transcription start site region 143223
Tssr143224 17 26272956 to 26272962 6 + TSS region transcription start site region 143224
Tssr143225 17 26275795 to 26275799 4 + TSS region transcription start site region 143225
Hst4 17 26286363 to 29495465 3209102 heritable phenotypic marker hybrid sterility 4
Eye2 17 26286363 to 40794146 14507783 QTL eye weight 2
Hba-ps4 17 26286363 to 26287061 698 - pseudogene hemoglobin alpha, pseudogene 4
Tssr146934 17 26287058 to 26287065 7 - TSS region transcription start site region 146934
Gm50015 17 26317418 to 26322622 5204 - lincRNA gene predicted gene, 50015
Tssr143226 17 26360366 to 26360416 50 + TSS region transcription start site region 143226
Cpgi8807 17 26414210 to 26415794 1584 CpG island CpG island 8807
Tssr143227 17 26414820 to 26414895 75 + TSS region transcription start site region 143227
Neurl1b 17 26414965 to 26446349 31384 + protein coding gene neuralized E3 ubiquitin protein ligase 1B
Cpgi8808 17 26431737 to 26432399 662 CpG island CpG island 8808
Cpgi8809 17 26438264 to 26439423 1159 CpG island CpG island 8809
Tssr143228 17 26442153 to 26442156 3 + TSS region transcription start site region 143228
Tssr146935 17 26465098 to 26465135 37 - TSS region transcription start site region 146935
Gm34455 17 26467654 to 26503322 35668 - lncRNA gene predicted gene, 34455
Tssr146936 17 26490915 to 26490918 3 - TSS region transcription start site region 146936
D17Pri8 17 26496611 to 26497056 445 DNA segment DNA segment, Chr 17, Princeton University 8
Tssr146937 17 26503092 to 26503101 9 - TSS region transcription start site region 146937
Tssr143229 17 26503379 to 26503398 19 + TSS region transcription start site region 143229
Tssr146938 17 26504327 to 26504340 13 - TSS region transcription start site region 146938
Dusp1 17 26505591 to 26508472 2881 - protein coding gene dual specificity phosphatase 1
Tssr146939 17 26505955 to 26505967 12 - TSS region transcription start site region 146939
Tssr146940 17 26505986 to 26505997 11 - TSS region transcription start site region 146940
Tssr146941 17 26506144 to 26506166 22 - TSS region transcription start site region 146941
Tssr146942 17 26506172 to 26506188 16 - TSS region transcription start site region 146942
Tssr146943 17 26506248 to 26506270 22 - TSS region transcription start site region 146943
Tssr143230 17 26506253 to 26506371 118 + TSS region transcription start site region 143230
Tssr146944 17 26506378 to 26506395 17 - TSS region transcription start site region 146944
Tssr146945 17 26506438 to 26506458 20 - TSS region transcription start site region 146945
Tssr146946 17 26506502 to 26506516 14 - TSS region transcription start site region 146946
Tssr146947 17 26506526 to 26506537 11 - TSS region transcription start site region 146947
Tssr146948 17 26506543 to 26506563 20 - TSS region transcription start site region 146948
Tssr146949 17 26506610 to 26506631 21 - TSS region transcription start site region 146949
Cpgi8810 17 26507105 to 26507350 245 CpG island CpG island 8810
Tssr146950 17 26507153 to 26507172 19 - TSS region transcription start site region 146950
Tssr143231 17 26507494 to 26507501 7 + TSS region transcription start site region 143231
Cpgi8811 17 26507570 to 26509023 1453 CpG island CpG island 8811
Tssr146951 17 26507628 to 26507659 31 - TSS region transcription start site region 146951
Tssr146952 17 26508189 to 26508207 18 - TSS region transcription start site region 146952
Tssr146953 17 26508214 to 26508247 33 - TSS region transcription start site region 146953
Tssr146954 17 26508463 to 26508482 19 - TSS region transcription start site region 146954
Tssr143232 17 26508648 to 26508680 32 + TSS region transcription start site region 143232
Tssr143233 17 26508697 to 26508731 34 + TSS region transcription start site region 143233
Tssr143234 17 26508749 to 26508774 25 + TSS region transcription start site region 143234
Tssr146955 17 26508864 to 26508882 18 - TSS region transcription start site region 146955
Tssr5044 17 26508951 to 26508964 13 + TSS region transcription start site region 5044
Tssr5045 17 26509463 to 26509468 5 - TSS region transcription start site region 5045
Tssr146956 17 26509494 to 26509499 5 - TSS region transcription start site region 146956
Tssr5046 17 26509516 to 26509521 5 - TSS region transcription start site region 5046
Tssr5047 17 26509525 to 26509532 7 - TSS region transcription start site region 5047
Tssr146957 17 26509559 to 26509569 10 - TSS region transcription start site region 146957
Tssr143235 17 26509701 to 26509708 7 + TSS region transcription start site region 143235
Tssr143236 17 26509726 to 26509741 15 + TSS region transcription start site region 143236
Tssr143237 17 26512727 to 26512760 33 + TSS region transcription start site region 143237
Tssr146958 17 26514760 to 26514765 5 - TSS region transcription start site region 146958
Tssr143238 17 26514926 to 26514952 26 + TSS region transcription start site region 143238
D17Lon7 17 26526025 to 26526242 217 DNA segment DNA segment, Chr 17, London 7
Tssr146959 17 26531682 to 26531697 15 - TSS region transcription start site region 146959
Tssr143239 17 26531808 to 26531839 31 + TSS region transcription start site region 143239
Tssr146960 17 26532614 to 26532617 3 - TSS region transcription start site region 146960
Tssr146961 17 26532637 to 26532647 10 - TSS region transcription start site region 146961
Tssr146962 17 26532665 to 26532676 11 - TSS region transcription start site region 146962
Tssr146963 17 26532710 to 26532723 13 - TSS region transcription start site region 146963
Tssr143240 17 26532879 to 26532886 7 + TSS region transcription start site region 143240
Tssr143241 17 26532895 to 26532900 5 + TSS region transcription start site region 143241
Tssr143242 17 26532909 to 26532930 21 + TSS region transcription start site region 143242
Tssr143243 17 26532934 to 26532955 21 + TSS region transcription start site region 143243
Tssr143244 17 26532965 to 26532972 7 + TSS region transcription start site region 143244
Tssr143245 17 26534125 to 26534173 48 + TSS region transcription start site region 143245
Gm34606 17 26534926 to 26535422 496 + lncRNA gene predicted gene, 34606
Tssr5048 17 26535331 to 26535357 26 + TSS region transcription start site region 5048
Tssr5049 17 26535398 to 26535408 10 - TSS region transcription start site region 5049
Tssr5050 17 26535829 to 26535836 7 + TSS region transcription start site region 5050
Tssr143246 17 26538330 to 26538352 22 + TSS region transcription start site region 143246
Gm8225 17 26542760 to 26543715 955 + pseudogene predicted gene 8225
Tssr143247 17 26551440 to 26551476 36 + TSS region transcription start site region 143247
1700049J03Rik 17 26554254 to 26561499 7245 - antisense lncRNA gene RIKEN cDNA 1700049J03 gene