Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:26051394-26171423

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab11fip3 17 25989036 to 26069409 80373 - protein coding gene RAB11 family interacting protein 3 (class II)
Tssr146904 17 26058679 to 26058681 2 - TSS region transcription start site region 146904
Cpgi8795 17 26067468 to 26069891 2423 CpG island CpG island 8795
Tssr146905 17 26069475 to 26069550 75 - TSS region transcription start site region 146905
Tssr143200 17 26069635 to 26069639 4 + TSS region transcription start site region 143200
Gm17814 17 26073147 to 26074754 1607 + pseudogene predicted gene, 17814
Decr2 17 26081211 to 26090164 8953 - protein coding gene 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal
Tssr146906 17 26081611 to 26081621 10 - TSS region transcription start site region 146906
Tssr146907 17 26082079 to 26082098 19 - TSS region transcription start site region 146907
Tssr5043 17 26087248 to 26087258 10 + TSS region transcription start site region 5043
Tssr143201 17 26087272 to 26087287 15 + TSS region transcription start site region 143201
Tssr146908 17 26087392 to 26087421 29 - TSS region transcription start site region 146908
Cpgi8796 17 26089896 to 26090518 622 CpG island CpG island 8796
Tssr146909 17 26090066 to 26090100 34 - TSS region transcription start site region 146909
Tssr146910 17 26090112 to 26090156 44 - TSS region transcription start site region 146910
Tssr146911 17 26090159 to 26090171 12 - TSS region transcription start site region 146911
Tssr146912 17 26090187 to 26090208 21 - TSS region transcription start site region 146912
Tssr146913 17 26090251 to 26090315 64 - TSS region transcription start site region 146913
Nme4 17 26091734 to 26095508 3774 - protein coding gene NME/NM23 nucleoside diphosphate kinase 4
Cpgi8797 17 26095097 to 26095663 566 CpG island CpG island 8797
Tssr146914 17 26095437 to 26095449 12 - TSS region transcription start site region 146914
Tssr146915 17 26095451 to 26095461 10 - TSS region transcription start site region 146915
Tssr146916 17 26095464 to 26095480 16 - TSS region transcription start site region 146916
Tssr146917 17 26095487 to 26095514 27 - TSS region transcription start site region 146917
Gm8186 17 26098872 to 26099257 385 - pseudogene predicted gene 8186
Tssr146918 17 26099257 to 26099259 2 - TSS region transcription start site region 146918
Tssr143202 17 26111394 to 26111423 29 + TSS region transcription start site region 143202
Cpgi8798 17 26112930 to 26114042 1112 CpG island CpG island 8798
Tssr143203 17 26113286 to 26113363 77 + TSS region transcription start site region 143203
Tmem8 17 26113316 to 26123254 9938 + protein coding gene transmembrane protein 8
Tssr146919 17 26113551 to 26113591 40 - TSS region transcription start site region 146919
Tssr143204 17 26113678 to 26113706 28 + TSS region transcription start site region 143204
Tssr143205 17 26113710 to 26113719 9 + TSS region transcription start site region 143205
Tssr143206 17 26113788 to 26113807 19 + TSS region transcription start site region 143206
Tssr143207 17 26113810 to 26113815 5 + TSS region transcription start site region 143207
Tssr143208 17 26116792 to 26116803 11 + TSS region transcription start site region 143208
Cpgi8799 17 26120067 to 26120528 461 CpG island CpG island 8799
Cpgi8800 17 26123294 to 26123998 704 CpG island CpG island 8800
Tssr143209 17 26123504 to 26123513 9 + TSS region transcription start site region 143209
Tssr143210 17 26123514 to 26123554 40 + TSS region transcription start site region 143210
Mrpl28 17 26123520 to 26126613 3093 + protein coding gene mitochondrial ribosomal protein L28
Tssr143211 17 26123566 to 26123579 13 + TSS region transcription start site region 143211
Tssr143212 17 26131313 to 26131327 14 + TSS region transcription start site region 143212
Gm46600 17 26136785 to 26138541 1756 - lncRNA gene predicted gene, 46600
Cpgi8801 17 26138278 to 26139548 1270 CpG island CpG island 8801
Tssr143213 17 26138661 to 26138769 108 + TSS region transcription start site region 143213
Axin1 17 26138688 to 26195811 57123 + protein coding gene axin 1
C430019F06Rik 17 26146760 to 26150176 3416 unclassified gene RIKEN cDNA C430019F06 gene
Gm49983 17 26158569 to 26159004 435 - pseudogene predicted gene, 49983
Tssr143214 17 26159672 to 26159674 2 + TSS region transcription start site region 143214