Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25911387-25987565

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26694 17 25794894 to 25964784 169890 + lincRNA gene predicted gene, 26694
Rab40c 17 25882114 to 25919714 37600 - protein coding gene Rab40C, member RAS oncogene family
Cpgi8791 17 25918904 to 25920842 1938 CpG island CpG island 8791
Gm16278 17 25919089 to 25935745 16656 + unclassified non-coding RNA gene predicted gene 16278
Tssr143197 17 25919341 to 25919368 27 + TSS region transcription start site region 143197
Tssr146876 17 25919676 to 25919740 64 - TSS region transcription start site region 146876
Pigq 17 25926420 to 25942877 16457 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class Q
Tssr146877 17 25930518 to 25930521 3 - TSS region transcription start site region 146877
Cpgi8792 17 25941585 to 25942423 838 CpG island CpG island 8792
Tssr146878 17 25941882 to 25941889 7 - TSS region transcription start site region 146878
Tssr146879 17 25941926 to 25941981 55 - TSS region transcription start site region 146879
Nhlrc4 17 25942233 to 25944931 2698 - protein coding gene NHL repeat containing 4
Tssr146880 17 25942821 to 25942856 35 - TSS region transcription start site region 146880
Tssr146881 17 25942860 to 25942865 5 - TSS region transcription start site region 146881
A930017K11Rik 17 25946387 to 25952565 6178 - protein coding gene RIKEN cDNA A930017K11 gene
Cpgi8793 17 25951181 to 25952575 1394 CpG island CpG island 8793
D630044L22Rik 17 25951472 to 25963610 12138 + protein coding gene RIKEN cDNA gene D630044L22 gene
Tssr146882 17 25952053 to 25952082 29 - TSS region transcription start site region 146882
Capn15 17 25958364 to 25985796 27432 - protein coding gene calpain 15
Tssr143198 17 25961738 to 25961767 29 + TSS region transcription start site region 143198
Tssr146883 17 25972084 to 25972088 4 - TSS region transcription start site region 146883
Tssr146884 17 25979887 to 25979898 11 - TSS region transcription start site region 146884
Tssr146885 17 25979936 to 25979950 14 - TSS region transcription start site region 146885
Cpgi8794 17 25985070 to 25986265 1195 CpG island CpG island 8794
Tssr146886 17 25985623 to 25985634 11 - TSS region transcription start site region 146886
Tssr146887 17 25985641 to 25985772 131 - TSS region transcription start site region 146887
Tssr146888 17 25985773 to 25985795 22 - TSS region transcription start site region 146888
1700022N22Rik 17 25985815 to 25988469 2654 + lincRNA gene RIKEN cDNA 1700022N22 gene
Tssr143199 17 25985825 to 25985834 9 + TSS region transcription start site region 143199