Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25829488-25859503

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8784 17 25828605 to 25829541 936 CpG island CpG island 8784
Jmjd8 17 25829043 to 25831843 2800 + protein coding gene jumonji domain containing 8
Stub1 17 25830636 to 25833361 2725 - protein coding gene STIP1 homology and U-Box containing protein 1
Mir3082 17 25831365 to 25831428 63 - miRNA gene microRNA 3082
Cpgi8785 17 25832087 to 25833826 1739 CpG island CpG island 8785
Tssr146863 17 25832868 to 25832877 9 - TSS region transcription start site region 146863
Tssr146864 17 25832890 to 25832966 76 - TSS region transcription start site region 146864
Tssr143193 17 25833107 to 25833154 47 + TSS region transcription start site region 143193
Tssr146865 17 25833365 to 25833402 37 - TSS region transcription start site region 146865
Gm20683 17 25834465 to 25841763 7298 - protein coding gene predicted gene 20683
Rhbdl1 17 25834465 to 25837295 2830 - protein coding gene rhomboid like 1
Cpgi8786 17 25836535 to 25837380 845 CpG island CpG island 8786
Tssr146866 17 25837109 to 25837199 90 - TSS region transcription start site region 146866
Rhot2 17 25838838 to 25844851 6013 - protein coding gene ras homolog family member T2
D17Jcs48 17 25843588 to 25843787 199 DNA segment DNA segment, Chr 17, John C. Schimenti 48
Cpgi8787 17 25844000 to 25844685 685 CpG island CpG island 8787
Tssr146867 17 25844419 to 25844428 9 - TSS region transcription start site region 146867
Tssr146868 17 25844444 to 25844472 28 - TSS region transcription start site region 146868
Tssr146869 17 25844488 to 25844503 15 - TSS region transcription start site region 146869
Tssr146870 17 25844514 to 25844565 51 - TSS region transcription start site region 146870
Wdr90 17 25844771 to 25861501 16730 - protein coding gene WD repeat domain 90
D17Aus57 17 25857486 to 25857659 173 DNA segment DNA segment, Chr 17, Austin 57