Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25779090-25839171

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ciao3 17 25773776 to 25783332 9556 + protein coding gene cytosolic iron-sulfur assembly component 3
Haghl 17 25779843 to 25785670 5827 - protein coding gene hydroxyacylglutathione hydrolase-like
Mir6966 17 25780808 to 25780879 71 + miRNA gene microRNA 6966
Tssr146856 17 25785324 to 25785343 19 - TSS region transcription start site region 146856
Cpgi8776 17 25785336 to 25785721 385 CpG island CpG island 8776
Tssr146857 17 25785533 to 25785591 58 - TSS region transcription start site region 146857
Tssr143178 17 25786566 to 25786584 18 + TSS region transcription start site region 143178
Ccdc78 17 25786580 to 25790513 3933 + protein coding gene coiled-coil domain containing 78
Tssr143179 17 25786585 to 25786613 28 + TSS region transcription start site region 143179
Fam173a 17 25790508 to 25792284 1776 - protein coding gene family with sequence similarity 173, member A
Cpgi8777 17 25791548 to 25792697 1149 CpG island CpG island 8777
Tssr146858 17 25792347 to 25792380 33 - TSS region transcription start site region 146858
Tssr146859 17 25792383 to 25792401 18 - TSS region transcription start site region 146859
Metrn 17 25794571 to 25797045 2474 - protein coding gene meteorin, glial cell differentiation regulator
Gm26694 17 25794894 to 25964784 169890 + lincRNA gene predicted gene, 26694
Tssr146860 17 25795639 to 25795664 25 - TSS region transcription start site region 146860
Cpgi8778 17 25796132 to 25797361 1229 CpG island CpG island 8778
Tssr146861 17 25796964 to 25796981 17 - TSS region transcription start site region 146861
Tssr146862 17 25797032 to 25797075 43 - TSS region transcription start site region 146862
Gm41551 17 25803240 to 25808734 5494 + lncRNA gene predicted gene, 41551
Tssr143180 17 25803392 to 25803405 13 + TSS region transcription start site region 143180
Cpgi8779 17 25808257 to 25810195 1938 CpG island CpG island 8779
Tssr143181 17 25809012 to 25809032 20 + TSS region transcription start site region 143181
Fbxl16 17 25809085 to 25821244 12159 + protein coding gene F-box and leucine-rich repeat protein 16
Tssr143182 17 25809090 to 25809171 81 + TSS region transcription start site region 143182
Cpgi8780 17 25813426 to 25813884 458 CpG island CpG island 8780
Tssr143183 17 25814142 to 25814147 5 + TSS region transcription start site region 143183
Tssr143184 17 25817919 to 25817938 19 + TSS region transcription start site region 143184
Cpgi8781 17 25819272 to 25819895 623 CpG island CpG island 8781
Tssr143185 17 25819823 to 25819835 12 + TSS region transcription start site region 143185
Tssr143186 17 25820153 to 25820178 25 + TSS region transcription start site region 143186
Tssr143187 17 25820379 to 25820393 14 + TSS region transcription start site region 143187
Tssr143188 17 25820653 to 25820675 22 + TSS region transcription start site region 143188
Cpgi8782 17 25823523 to 25823880 357 CpG island CpG island 8782
Tssr143189 17 25823626 to 25823637 11 + TSS region transcription start site region 143189
Wdr24 17 25823627 to 25828730 5103 + protein coding gene WD repeat domain 24
Tssr143190 17 25823642 to 25823706 64 + TSS region transcription start site region 143190
Cpgi8783 17 25824079 to 25824495 416 CpG island CpG island 8783
Tssr5041 17 25827862 to 25827910 48 + TSS region transcription start site region 5041
Cpgi8784 17 25828605 to 25829541 936 CpG island CpG island 8784
Tssr143191 17 25828791 to 25828826 35 + TSS region transcription start site region 143191
Tssr143192 17 25829036 to 25829076 40 + TSS region transcription start site region 143192
Jmjd8 17 25829043 to 25831843 2800 + protein coding gene jumonji domain containing 8
Stub1 17 25830636 to 25833361 2725 - protein coding gene STIP1 homology and U-Box containing protein 1
Mir3082 17 25831365 to 25831428 63 - miRNA gene microRNA 3082
Cpgi8785 17 25832087 to 25833826 1739 CpG island CpG island 8785
Tssr146863 17 25832868 to 25832877 9 - TSS region transcription start site region 146863
Tssr146864 17 25832890 to 25832966 76 - TSS region transcription start site region 146864
Tssr143193 17 25833107 to 25833154 47 + TSS region transcription start site region 143193
Tssr146865 17 25833365 to 25833402 37 - TSS region transcription start site region 146865
Gm20683 17 25834465 to 25841763 7298 - protein coding gene predicted gene 20683
Rhbdl1 17 25834465 to 25837295 2830 - protein coding gene rhomboid like 1
Cpgi8786 17 25836535 to 25837380 845 CpG island CpG island 8786
Tssr146866 17 25837109 to 25837199 90 - TSS region transcription start site region 146866
Rhot2 17 25838838 to 25844851 6013 - protein coding gene ras homolog family member T2