Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25720201-25800521

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chtf18 17 25719030 to 25727438 8408 - protein coding gene CTF18, chromosome transmission fidelity factor 18
Cpgi8774 17 25726877 to 25727835 958 CpG island CpG island 8774
Tssr146846 17 25727344 to 25727363 19 - TSS region transcription start site region 146846
Tssr146847 17 25727364 to 25727426 62 - TSS region transcription start site region 146847
Tssr143173 17 25727726 to 25727797 71 + TSS region transcription start site region 143173
Rpusd1 17 25727751 to 25731456 3705 + protein coding gene RNA pseudouridylate synthase domain containing 1
Opfaq5 17 25731951 to 28773124 3041173 QTL open field activity QTL 5
Mslnl 17 25736040 to 25748330 12290 + protein coding gene mesothelin-like
Tssr5040 17 25736214 to 25736240 26 + TSS region transcription start site region 5040
Gm25083 17 25746788 to 25746879 91 - miRNA gene predicted gene, 25083
Tssr143174 17 25748613 to 25748622 9 + TSS region transcription start site region 143174
Msln 17 25748614 to 25754327 5713 - protein coding gene mesothelin
Tssr146848 17 25751113 to 25751132 19 - TSS region transcription start site region 146848
Tssr146849 17 25751522 to 25751568 46 - TSS region transcription start site region 146849
Tssr146850 17 25752352 to 25752385 33 - TSS region transcription start site region 146850
Tssr146851 17 25754048 to 25754069 21 - TSS region transcription start site region 146851
Tssr146852 17 25754225 to 25754240 15 - TSS region transcription start site region 146852
Tssr146853 17 25754327 to 25754338 11 - TSS region transcription start site region 146853
Tssr146854 17 25754343 to 25754382 39 - TSS region transcription start site region 146854
Tssr146855 17 25754516 to 25754521 5 - TSS region transcription start site region 146855
Tssr143175 17 25756653 to 25756665 12 + TSS region transcription start site region 143175
1700080C20Rik 17 25760201 to 25760521 320 unclassified gene RIKEN cDNA 1700080C20 gene
Gm41550 17 25767378 to 25772544 5166 + lncRNA gene predicted gene, 41550
Cpgi8775 17 25773453 to 25774090 637 CpG island CpG island 8775
Tssr143176 17 25773769 to 25773778 9 + TSS region transcription start site region 143176
Ciao3 17 25773776 to 25783332 9556 + protein coding gene cytosolic iron-sulfur assembly component 3
Tssr143177 17 25773787 to 25773824 37 + TSS region transcription start site region 143177
Haghl 17 25779843 to 25785670 5827 - protein coding gene hydroxyacylglutathione hydrolase-like
Mir6966 17 25780808 to 25780879 71 + miRNA gene microRNA 6966
Tssr146856 17 25785324 to 25785343 19 - TSS region transcription start site region 146856
Cpgi8776 17 25785336 to 25785721 385 CpG island CpG island 8776
Tssr146857 17 25785533 to 25785591 58 - TSS region transcription start site region 146857
Tssr143178 17 25786566 to 25786584 18 + TSS region transcription start site region 143178
Ccdc78 17 25786580 to 25790513 3933 + protein coding gene coiled-coil domain containing 78
Tssr143179 17 25786585 to 25786613 28 + TSS region transcription start site region 143179
Fam173a 17 25790508 to 25792284 1776 - protein coding gene family with sequence similarity 173, member A
Cpgi8777 17 25791548 to 25792697 1149 CpG island CpG island 8777
Tssr146858 17 25792347 to 25792380 33 - TSS region transcription start site region 146858
Tssr146859 17 25792383 to 25792401 18 - TSS region transcription start site region 146859
Metrn 17 25794571 to 25797045 2474 - protein coding gene meteorin, glial cell differentiation regulator
Gm26694 17 25794894 to 25964784 169890 + lincRNA gene predicted gene, 26694
Tssr146860 17 25795639 to 25795664 25 - TSS region transcription start site region 146860
Cpgi8778 17 25796132 to 25797361 1229 CpG island CpG island 8778
Tssr146861 17 25796964 to 25796981 17 - TSS region transcription start site region 146861
Tssr146862 17 25797032 to 25797075 43 - TSS region transcription start site region 146862