Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25323554-25543574

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rtmq1 17 22681055 to 25502498 2821443 QTL renal tumor modifier QTL 1
Gm5430 17 25326612 to 25327526 914 - pseudogene predicted gene 5430
Gm50085 17 25330692 to 25332675 1983 + pseudogene predicted gene, 50085
D17Jcs44 17 25341521 to 25341757 236 DNA segment DNA segment, Chr 17, John C. Schimenti 44
Tpsab1 17 25343245 to 25345562 2317 - protein coding gene tryptase alpha/beta 1
Tssr146836 17 25345559 to 25345563 4 - TSS region transcription start site region 146836
D17Mit46 17 25365940 to 25366175 235 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 46
Cd8mts5 17 25365940 to 25366175 235 QTL CD8 memory T cell subset 5
Bbaa28 17 25365940 to 43665344 18299404 QTL B.burgdorferi-associated arthritis 28
Skull24 17 25365940 to 25366175 235 QTL skull morphology 24
Tssr143153 17 25366280 to 25366312 32 + TSS region transcription start site region 143153
Tpsb2 17 25366303 to 25368096 1793 + protein coding gene tryptase beta 2
Tssr143154 17 25366315 to 25366328 13 + TSS region transcription start site region 143154
Tssr143155 17 25369267 to 25369280 13 + TSS region transcription start site region 143155
Tpsg1 17 25369273 to 25374442 5169 + protein coding gene tryptase gamma 1
Tssr143156 17 25369328 to 25369337 9 + TSS region transcription start site region 143156
Tssr143157 17 25370550 to 25370566 16 + TSS region transcription start site region 143157
Tssr143158 17 25370575 to 25370599 24 + TSS region transcription start site region 143158
Tssr5039 17 25370614 to 25370633 19 + TSS region transcription start site region 5039
Cacna1h 17 25374285 to 25433783 59498 - protein coding gene calcium channel, voltage-dependent, T type, alpha 1H subunit
Gm33617 17 25388364 to 25390079 1715 + lncRNA gene predicted gene, 33617
Tssr146837 17 25392491 to 25392493 2 - TSS region transcription start site region 146837
Tssr146838 17 25408204 to 25408208 4 - TSS region transcription start site region 146838
Cpgi8763 17 25432461 to 25434638 2177 CpG island CpG island 8763
Tssr146839 17 25433263 to 25433307 44 - TSS region transcription start site region 146839
Tssr146840 17 25433554 to 25433574 20 - TSS region transcription start site region 146840
Tssr146841 17 25433611 to 25433621 10 - TSS region transcription start site region 146841
Tssr146842 17 25433742 to 25433767 25 - TSS region transcription start site region 146842
Tssr146843 17 25433775 to 25433790 15 - TSS region transcription start site region 146843
Gm33565 17 25433861 to 25436339 2478 + lncRNA gene predicted gene, 33565
Tssr143159 17 25453719 to 25453742 23 + TSS region transcription start site region 143159
Tssr143160 17 25454527 to 25454553 26 + TSS region transcription start site region 143160
Tekt4 17 25454675 to 25476602 21927 + protein coding gene tektin 4
Tssr143161 17 25471564 to 25471637 73 + TSS region transcription start site region 143161
Tssr143162 17 25471673 to 25471688 15 + TSS region transcription start site region 143162
Tssr143163 17 25471703 to 25471717 14 + TSS region transcription start site region 143163
Cpgi8764 17 25471759 to 25472289 530 CpG island CpG island 8764
Cpgi8765 17 25474437 to 25475078 641 CpG island CpG island 8765
Sstr5 17 25489875 to 25497288 7413 - protein coding gene somatostatin receptor 5
Cpgi8766 17 25496530 to 25497305 775 CpG island CpG island 8766
D17Jcs45 17 25498932 to 25499179 247 DNA segment DNA segment, Chr 17, John C. Schimenti 45
Cpgi8767 17 25518204 to 25518562 358 CpG island CpG island 8767
Tssr143164 17 25518468 to 25518484 16 + TSS region transcription start site region 143164
Gm33727 17 25518585 to 25522565 3980 + lncRNA gene predicted gene, 33727
Gm50025 17 25531437 to 25533045 1608 - lincRNA gene predicted gene, 50025
Gm33801 17 25537017 to 25538938 1921 - lncRNA gene predicted gene, 33801
Cpgi8768 17 25539717 to 25539908 191 CpG island CpG island 8768