Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25319285-25488783

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prss29 17 25318654 to 25322684 4030 + protein coding gene protease, serine 29
Gm5430 17 25326612 to 25327526 914 - pseudogene predicted gene 5430
Gm50085 17 25330692 to 25332675 1983 + pseudogene predicted gene, 50085
D17Jcs44 17 25341521 to 25341757 236 DNA segment DNA segment, Chr 17, John C. Schimenti 44
Tpsab1 17 25343245 to 25345562 2317 - protein coding gene tryptase alpha/beta 1
Tssr146836 17 25345559 to 25345563 4 - TSS region transcription start site region 146836
Skull24 17 25365940 to 25366175 235 QTL skull morphology 24
Cd8mts5 17 25365940 to 25366175 235 QTL CD8 memory T cell subset 5
D17Mit46 17 25365940 to 25366175 235 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 46
Bbaa28 17 25365940 to 43665344 18299404 QTL B.burgdorferi-associated arthritis 28
Tssr143153 17 25366280 to 25366312 32 + TSS region transcription start site region 143153
Tpsb2 17 25366303 to 25368096 1793 + protein coding gene tryptase beta 2
Tssr143154 17 25366315 to 25366328 13 + TSS region transcription start site region 143154
Tssr143155 17 25369267 to 25369280 13 + TSS region transcription start site region 143155
Tpsg1 17 25369273 to 25374442 5169 + protein coding gene tryptase gamma 1
Tssr143156 17 25369328 to 25369337 9 + TSS region transcription start site region 143156
Tssr143157 17 25370550 to 25370566 16 + TSS region transcription start site region 143157
Tssr143158 17 25370575 to 25370599 24 + TSS region transcription start site region 143158
Tssr5039 17 25370614 to 25370633 19 + TSS region transcription start site region 5039
Cacna1h 17 25374285 to 25433783 59498 - protein coding gene calcium channel, voltage-dependent, T type, alpha 1H subunit
Gm33617 17 25388364 to 25390079 1715 + lncRNA gene predicted gene, 33617
Tssr146837 17 25392491 to 25392493 2 - TSS region transcription start site region 146837
Tssr146838 17 25408204 to 25408208 4 - TSS region transcription start site region 146838
Cpgi8763 17 25432461 to 25434638 2177 CpG island CpG island 8763
Tssr146839 17 25433263 to 25433307 44 - TSS region transcription start site region 146839
Tssr146840 17 25433554 to 25433574 20 - TSS region transcription start site region 146840
Tssr146841 17 25433611 to 25433621 10 - TSS region transcription start site region 146841
Tssr146842 17 25433742 to 25433767 25 - TSS region transcription start site region 146842
Tssr146843 17 25433775 to 25433790 15 - TSS region transcription start site region 146843
Gm33565 17 25433861 to 25436339 2478 + lncRNA gene predicted gene, 33565
Tssr143159 17 25453719 to 25453742 23 + TSS region transcription start site region 143159
Tssr143160 17 25454527 to 25454553 26 + TSS region transcription start site region 143160
Tekt4 17 25454675 to 25476602 21927 + protein coding gene tektin 4
Tssr143161 17 25471564 to 25471637 73 + TSS region transcription start site region 143161
Tssr143162 17 25471673 to 25471688 15 + TSS region transcription start site region 143162
Tssr143163 17 25471703 to 25471717 14 + TSS region transcription start site region 143163
Cpgi8764 17 25471759 to 25472289 530 CpG island CpG island 8764
Cpgi8765 17 25474437 to 25475078 641 CpG island CpG island 8765