Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25276308-25458096

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr143150 17 25298389 to 25298403 14 + TSS region transcription start site region 143150
Prss34 17 25298394 to 25300165 1771 + protein coding gene protease, serine 34
Gm25921 17 25306112 to 25306248 136 + snoRNA gene predicted gene, 25921
Tssr143151 17 25308642 to 25308647 5 + TSS region transcription start site region 143151
Prss28 17 25308646 to 25311876 3230 + protein coding gene protease, serine 28
Tssr5038 17 25317560 to 25317586 26 + TSS region transcription start site region 5038
Tssr143152 17 25318649 to 25318657 8 + TSS region transcription start site region 143152
Prss29 17 25318654 to 25322684 4030 + protein coding gene protease, serine 29
D17Mit26 17 25319036 to 25319178 142 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 26
D17Aus126 17 25319044 to 25319138 94 DNA segment DNA segment, Chr 17, Austin 126
Gm5430 17 25326612 to 25327526 914 - pseudogene predicted gene 5430
Gm50085 17 25330692 to 25332675 1983 + pseudogene predicted gene, 50085
D17Jcs44 17 25341521 to 25341757 236 DNA segment DNA segment, Chr 17, John C. Schimenti 44
Tpsab1 17 25343245 to 25345562 2317 - protein coding gene tryptase alpha/beta 1
Tssr146836 17 25345559 to 25345563 4 - TSS region transcription start site region 146836
Bbaa28 17 25365940 to 43665344 18299404 QTL B.burgdorferi-associated arthritis 28
D17Mit46 17 25365940 to 25366175 235 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 46
Cd8mts5 17 25365940 to 25366175 235 QTL CD8 memory T cell subset 5
Skull24 17 25365940 to 25366175 235 QTL skull morphology 24
Tssr143153 17 25366280 to 25366312 32 + TSS region transcription start site region 143153
Tpsb2 17 25366303 to 25368096 1793 + protein coding gene tryptase beta 2
Tssr143154 17 25366315 to 25366328 13 + TSS region transcription start site region 143154
Tssr143155 17 25369267 to 25369280 13 + TSS region transcription start site region 143155
Tpsg1 17 25369273 to 25374442 5169 + protein coding gene tryptase gamma 1
Tssr143156 17 25369328 to 25369337 9 + TSS region transcription start site region 143156
Tssr143157 17 25370550 to 25370566 16 + TSS region transcription start site region 143157
Tssr143158 17 25370575 to 25370599 24 + TSS region transcription start site region 143158
Tssr5039 17 25370614 to 25370633 19 + TSS region transcription start site region 5039
Cacna1h 17 25374285 to 25433783 59498 - protein coding gene calcium channel, voltage-dependent, T type, alpha 1H subunit
Gm33617 17 25388364 to 25390079 1715 + lncRNA gene predicted gene, 33617
Tssr146837 17 25392491 to 25392493 2 - TSS region transcription start site region 146837
Tssr146838 17 25408204 to 25408208 4 - TSS region transcription start site region 146838
Cpgi8763 17 25432461 to 25434638 2177 CpG island CpG island 8763
Tssr146839 17 25433263 to 25433307 44 - TSS region transcription start site region 146839
Tssr146840 17 25433554 to 25433574 20 - TSS region transcription start site region 146840
Tssr146841 17 25433611 to 25433621 10 - TSS region transcription start site region 146841
Tssr146842 17 25433742 to 25433767 25 - TSS region transcription start site region 146842
Tssr146843 17 25433775 to 25433790 15 - TSS region transcription start site region 146843
Gm33565 17 25433861 to 25436339 2478 + lncRNA gene predicted gene, 33565
Tssr143159 17 25453719 to 25453742 23 + TSS region transcription start site region 143159
Tssr143160 17 25454527 to 25454553 26 + TSS region transcription start site region 143160
Tekt4 17 25454675 to 25476602 21927 + protein coding gene tektin 4