Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:25158397-25264443

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clcn7 17 25133391 to 25162104 28713 + protein coding gene chloride channel, voltage-sensitive 7
Tssr143140 17 25159654 to 25159699 45 + TSS region transcription start site region 143140
Tssr143141 17 25162441 to 25162456 15 + TSS region transcription start site region 143141
Ccdc154 17 25162461 to 25171913 9452 + protein coding gene coiled-coil domain containing 154
Gm38655 17 25172897 to 25175471 2574 - protein coding gene predicted gene, 38655
4930568E02Rik 17 25183813 to 25184459 646 unclassified gene RIKEN cDNA 4930568E02 gene
Cpgi8755 17 25184003 to 25185296 1293 CpG island CpG island 8755
Tssr146818 17 25184382 to 25184402 20 - TSS region transcription start site region 146818
Tssr146819 17 25184404 to 25184468 64 - TSS region transcription start site region 146819
Tssr5037 17 25184558 to 25184563 5 + TSS region transcription start site region 5037
BC003965 17 25184561 to 25187662 3101 + protein coding gene cDNA sequence BC003965
Tssr143142 17 25184564 to 25184602 38 + TSS region transcription start site region 143142
Tssr143143 17 25184610 to 25184618 8 + TSS region transcription start site region 143143
Cpgi8756 17 25187863 to 25189667 1804 CpG island CpG island 8756
Tssr143144 17 25188380 to 25188418 38 + TSS region transcription start site region 143144
Unkl 17 25188397 to 25234443 46046 + protein coding gene unkempt family like zinc finger
D17Jcs43 17 25189209 to 25189395 186 DNA segment DNA segment, Chr 17, John C. Schimenti 43
Tssr146820 17 25211898 to 25211910 12 - TSS region transcription start site region 146820
Tssr143145 17 25212845 to 25212849 4 + TSS region transcription start site region 143145
Cpgi8757 17 25221986 to 25222165 179 CpG island CpG island 8757
Cpgi8758 17 25222710 to 25222897 187 CpG island CpG island 8758
Tssr146821 17 25224693 to 25224701 8 - TSS region transcription start site region 146821
Tssr143146 17 25228176 to 25228186 10 + TSS region transcription start site region 143146
Gnptg 17 25234317 to 25240170 5853 - protein coding gene N-acetylglucosamine-1-phosphotransferase, gamma subunit
Cpgi8759 17 25239688 to 25240744 1056 CpG island CpG island 8759
Tssr146822 17 25240112 to 25240158 46 - TSS region transcription start site region 146822
Tssr143147 17 25240166 to 25240220 54 + TSS region transcription start site region 143147
Tsr3 17 25240170 to 25242798 2628 + protein coding gene TSR3 20S rRNA accumulation
Tssr143148 17 25240225 to 25240245 20 + TSS region transcription start site region 143148
Baiap3 17 25242659 to 25256364 13705 - protein coding gene BAI1-associated protein 3
Mir3547 17 25245551 to 25245638 87 - miRNA gene microRNA 3547
Tssr146823 17 25248132 to 25248150 18 - TSS region transcription start site region 146823
Cpgi8760 17 25248328 to 25248563 235 CpG island CpG island 8760
Cpgi8761 17 25255514 to 25256752 1238 CpG island CpG island 8761
Tssr146824 17 25256274 to 25256293 19 - TSS region transcription start site region 146824
Ube2i 17 25261916 to 25274622 12706 - protein coding gene ubiquitin-conjugating enzyme E2I