Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:24750047-25040077

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obrq13 17 11979442 to 24857795 12878353 QTL obesity resistance QTL 13
Cpgi8744 17 24752322 to 24753648 1326 CpG island CpG island 8744
Tssr143086 17 24752941 to 24752954 13 + TSS region transcription start site region 143086
Tssr143087 17 24752980 to 24752994 14 + TSS region transcription start site region 143087
Hs3st6 17 24752988 to 24758684 5696 + protein coding gene heparan sulfate (glucosamine) 3-O-sulfotransferase 6
D17Jcs50 17 24767087 to 24767276 189 DNA segment DNA segment, Chr 17, John C. Schimenti 50
Gm50022 17 24779703 to 24781984 2281 + lincRNA gene predicted gene, 50022
Tssr143088 17 24779724 to 24779751 27 + TSS region transcription start site region 143088
Tssr143089 17 24779784 to 24779799 15 + TSS region transcription start site region 143089
Cpgi8745 17 24803911 to 24804938 1027 CpG island CpG island 8745
Tssr143090 17 24804291 to 24804309 18 + TSS region transcription start site region 143090
Meiob 17 24804301 to 24839790 35489 + protein coding gene meiosis specific with OB domains
Tssr143091 17 24804312 to 24804325 13 + TSS region transcription start site region 143091
Tssr143092 17 24840108 to 24840123 15 + TSS region transcription start site region 143092
Remslp5 17 24840143 to 24864450 24307 QTL rapid eye movement sleep 5
Hagh 17 24840143 to 24864450 24307 + protein coding gene hydroxyacyl glutathione hydrolase
Fahd1 17 24848896 to 24850302 1406 - protein coding gene fumarylacetoacetate hydrolase domain containing 1
Cpgi8746 17 24849680 to 24850977 1297 CpG island CpG island 8746
Tssr146782 17 24849960 to 24849979 19 - TSS region transcription start site region 146782
Tssr146783 17 24849993 to 24850018 25 - TSS region transcription start site region 146783
Tssr146784 17 24850082 to 24850118 36 - TSS region transcription start site region 146784
Tssr146785 17 24850290 to 24850319 29 - TSS region transcription start site region 146785
Tssr146786 17 24850320 to 24850344 24 - TSS region transcription start site region 146786
Tssr143093 17 24850484 to 24850495 11 + TSS region transcription start site region 143093
Tssr143094 17 24850515 to 24850591 76 + TSS region transcription start site region 143094
Tssr143095 17 24850654 to 24850683 29 + TSS region transcription start site region 143095
Tssr143096 17 24850691 to 24850700 9 + TSS region transcription start site region 143096
Tssr143097 17 24850705 to 24850706 1 + TSS region transcription start site region 143097
Tssr143098 17 24850719 to 24850726 7 + TSS region transcription start site region 143098
Tssr143099 17 24850742 to 24850752 10 + TSS region transcription start site region 143099
D17Mit133 17 24857609 to 24857795 186 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 133
hlb156 17 24857609 to 31842786 6985177 heritable phenotypic marker heart, lung and blood, 156
Sst5 17 24857609 to 55405969 30548360 QTL susceptibility to tuberculosis 5
Gm41549 17 24866531 to 24878070 11539 - lncRNA gene predicted gene, 41549
Tssr146787 17 24874435 to 24874449 14 - TSS region transcription start site region 146787
Tssr143100 17 24874902 to 24874908 6 + TSS region transcription start site region 143100
Igfals 17 24877652 to 24882011 4359 + protein coding gene insulin-like growth factor binding protein, acid labile subunit
Tssr143101 17 24877834 to 24877875 41 + TSS region transcription start site region 143101
Tssr143102 17 24878225 to 24878264 39 + TSS region transcription start site region 143102
Tssr143103 17 24878694 to 24878705 11 + TSS region transcription start site region 143103
Tssr143104 17 24878724 to 24878781 57 + TSS region transcription start site region 143104
Tssr143105 17 24878791 to 24878799 8 + TSS region transcription start site region 143105
Nubp2 17 24882611 to 24886349 3738 - protein coding gene nucleotide binding protein 2
Cpgi8747 17 24885805 to 24887296 1491 CpG island CpG island 8747
Tssr146788 17 24885859 to 24885870 11 - TSS region transcription start site region 146788
Tssr146789 17 24885872 to 24885893 21 - TSS region transcription start site region 146789
Tssr146790 17 24885900 to 24885909 9 - TSS region transcription start site region 146790
Tssr146791 17 24885936 to 24885945 9 - TSS region transcription start site region 146791
Tssr143106 17 24885962 to 24885971 9 + TSS region transcription start site region 143106
Tssr143107 17 24885975 to 24885991 16 + TSS region transcription start site region 143107
Tssr143108 17 24886002 to 24886017 15 + TSS region transcription start site region 143108
Tssr143109 17 24886020 to 24886035 15 + TSS region transcription start site region 143109
Tssr146792 17 24886304 to 24886353 49 - TSS region transcription start site region 146792
Tssr146793 17 24886383 to 24886394 11 - TSS region transcription start site region 146793
Spsb3 17 24886643 to 24892152 5509 + protein coding gene splA/ryanodine receptor domain and SOCS box containing 3
Tssr143110 17 24886689 to 24886765 76 + TSS region transcription start site region 143110
Tssr143111 17 24886878 to 24886898 20 + TSS region transcription start site region 143111
Tssr143112 17 24891357 to 24891362 5 + TSS region transcription start site region 143112
Eme2 17 24892152 to 24895087 2935 - protein coding gene essential meiotic structure-specific endonuclease subunit 2
Cpgi8748 17 24894529 to 24897291 2762 CpG island CpG island 8748
Tssr146794 17 24895047 to 24895077 30 - TSS region transcription start site region 146794
Tssr143113 17 24895117 to 24895167 50 + TSS region transcription start site region 143113
Mrps34 17 24895120 to 24896274 1154 + protein coding gene mitochondrial ribosomal protein S34
Tssr146795 17 24895460 to 24895485 25 - TSS region transcription start site region 146795
Tssr143114 17 24895519 to 24895542 23 + TSS region transcription start site region 143114
Tssr143115 17 24896488 to 24896530 42 + TSS region transcription start site region 143115
Nme3 17 24896500 to 24897522 1022 + protein coding gene NME/NM23 nucleoside diphosphate kinase 3
Tssr143116 17 24896535 to 24896549 14 + TSS region transcription start site region 143116
Tssr143117 17 24896609 to 24896628 19 + TSS region transcription start site region 143117
Mapk8ip3 17 24897506 to 24936977 39471 - protein coding gene mitogen-activated protein kinase 8 interacting protein 3
D17Jcs40 17 24928286 to 24928484 198 DNA segment DNA segment, Chr 17, John C. Schimenti 40
Del(17D17Jcs40-D17Mit198)7Jcs 17 24928286 to 27659245 2730959 chromosomal deletion deletion, Chr 17, John C Schimenti 7
Tssr143118 17 24932846 to 24932847 1 + TSS region transcription start site region 143118
Cpgi8749 17 24936290 to 24937274 984 CpG island CpG island 8749
Tssr146796 17 24936930 to 24936967 37 - TSS region transcription start site region 146796
Tssr146797 17 24936969 to 24937002 33 - TSS region transcription start site region 146797
Jpt2 17 24942470 to 24960623 18153 - protein coding gene Jupiter microtubule associated homolog 2
Tssr146798 17 24943189 to 24943231 42 - TSS region transcription start site region 146798
Tssr146799 17 24943234 to 24943247 13 - TSS region transcription start site region 146799
Cpgi8750 17 24960146 to 24961207 1061 CpG island CpG island 8750
Tssr146800 17 24960598 to 24960614 16 - TSS region transcription start site region 146800
Tssr146801 17 24960620 to 24960654 34 - TSS region transcription start site region 146801
Tssr146802 17 24960661 to 24960693 32 - TSS region transcription start site region 146802
Cramp1l 17 24961226 to 25015788 54562 - protein coding gene cramped chromatin regulator homolog 1
Tssr146803 17 24997851 to 24997881 30 - TSS region transcription start site region 146803
Cpgi8751 17 25013579 to 25014621 1042 CpG island CpG island 8751
Tssr146804 17 25014306 to 25014334 28 - TSS region transcription start site region 146804
Cpgi8752 17 25015107 to 25017023 1916 CpG island CpG island 8752
Tssr146805 17 25015689 to 25015703 14 - TSS region transcription start site region 146805
Tssr146806 17 25015708 to 25015718 10 - TSS region transcription start site region 146806
Tssr146807 17 25015741 to 25015753 12 - TSS region transcription start site region 146807
Tssr146808 17 25015766 to 25015791 25 - TSS region transcription start site region 146808
Tssr146809 17 25015798 to 25015821 23 - TSS region transcription start site region 146809
Tssr143119 17 25016068 to 25016124 56 + TSS region transcription start site region 143119
Ift140 17 25016085 to 25099495 83410 + protein coding gene intraflagellar transport 140
Tssr143120 17 25016343 to 25016423 80 + TSS region transcription start site region 143120
Tssr143121 17 25016506 to 25016579 73 + TSS region transcription start site region 143121
Tssr143122 17 25016581 to 25016588 7 + TSS region transcription start site region 143122
Del(17D17Jcs41-D17Jcs15)8Jcs 17 25022791 to 27025780 2002989 chromosomal deletion deletion, Chr 17, John C Schimenti 8
D17Jcs41 17 25022791 to 25022989 198 DNA segment DNA segment, Chr 17, John C. Schimenti 41