Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:24687980-24817994

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syngr3 17 24685092 to 24689949 4857 - protein coding gene synaptogyrin 3
Cpgi8738 17 24689505 to 24690239 734 CpG island CpG island 8738
Tssr146762 17 24689880 to 24689887 7 - TSS region transcription start site region 146762
Tssr146763 17 24689901 to 24689960 59 - TSS region transcription start site region 146763
Gfer 17 24693187 to 24696156 2969 - protein coding gene growth factor, augmenter of liver regeneration
Cpgi8739 17 24695604 to 24696747 1143 CpG island CpG island 8739
Tssr146764 17 24695987 to 24695996 9 - TSS region transcription start site region 146764
Tssr146765 17 24696065 to 24696108 43 - TSS region transcription start site region 146765
Tssr146766 17 24696121 to 24696136 15 - TSS region transcription start site region 146766
Tssr146767 17 24696147 to 24696166 19 - TSS region transcription start site region 146767
Tssr146768 17 24696197 to 24696206 9 - TSS region transcription start site region 146768
Noxo1 17 24696234 to 24700529 4295 + protein coding gene NADPH oxidase organizer 1
Tssr143060 17 24696276 to 24696320 44 + TSS region transcription start site region 143060
Tssr146769 17 24696505 to 24696536 31 - TSS region transcription start site region 146769
Tssr146770 17 24696541 to 24696553 12 - TSS region transcription start site region 146770
Tssr5034 17 24696556 to 24696565 9 - TSS region transcription start site region 5034
Tssr146771 17 24696569 to 24696585 16 - TSS region transcription start site region 146771
Tssr143061 17 24696660 to 24696664 4 + TSS region transcription start site region 143061
Tssr143062 17 24698220 to 24698252 32 + TSS region transcription start site region 143062
Tssr143063 17 24698294 to 24698345 51 + TSS region transcription start site region 143063
Tssr143064 17 24698349 to 24698371 22 + TSS region transcription start site region 143064
Tssr5035 17 24699799 to 24699807 8 + TSS region transcription start site region 5035
Tssr143065 17 24699903 to 24699905 2 + TSS region transcription start site region 143065
Tbl3 17 24700653 to 24707653 7000 - protein coding gene transducin (beta)-like 3
Cpgi8740 17 24707412 to 24707906 494 CpG island CpG island 8740
Tssr146772 17 24707607 to 24707610 3 - TSS region transcription start site region 146772
Tssr146773 17 24707617 to 24707661 44 - TSS region transcription start site region 146773
Rnf151 17 24715839 to 24718057 2218 - protein coding gene ring finger protein 151
Tssr146774 17 24718006 to 24718018 12 - TSS region transcription start site region 146774
Tssr146775 17 24718051 to 24718062 11 - TSS region transcription start site region 146775
Tssr143066 17 24718088 to 24718118 30 + TSS region transcription start site region 143066
Cpgi8741 17 24719520 to 24720535 1015 CpG island CpG island 8741
Snhg9 17 24719531 to 24719965 434 - antisense lncRNA gene small nucleolar RNA host gene 9
Snora78 17 24719676 to 24719803 127 - snoRNA gene small nucleolar RNA, H/ACA box 7
Tssr146776 17 24719889 to 24719916 27 - TSS region transcription start site region 146776
Tssr146777 17 24719918 to 24719929 11 - TSS region transcription start site region 146777
Tssr143067 17 24719953 to 24719956 3 + TSS region transcription start site region 143067
Tssr146778 17 24719959 to 24719970 11 - TSS region transcription start site region 146778
Tssr143068 17 24720043 to 24720057 14 + TSS region transcription start site region 143068
Rps2 17 24720063 to 24721927 1864 + protein coding gene ribosomal protein S2
Tssr143069 17 24720067 to 24720083 16 + TSS region transcription start site region 143069
Tssr143070 17 24720102 to 24720118 16 + TSS region transcription start site region 143070
Tssr143071 17 24720181 to 24720189 8 + TSS region transcription start site region 143071
Tssr143072 17 24720251 to 24720262 11 + TSS region transcription start site region 143072
Snora64 17 24720789 to 24720905 116 + snoRNA gene small nucleolar RNA, H/ACA box 64
Ndufb10 17 24722067 to 24724388 2321 - protein coding gene NADH:ubiquinone oxidoreductase subunit B10
Cpgi8742 17 24723854 to 24724717 863 CpG island CpG island 8742
Tssr146779 17 24724333 to 24724344 11 - TSS region transcription start site region 146779
Tssr146780 17 24724374 to 24724455 81 - TSS region transcription start site region 146780
Tssr143073 17 24727819 to 24727839 20 + TSS region transcription start site region 143073
Rpl3l 17 24727829 to 24736149 8320 + protein coding gene ribosomal protein L3-like
Tssr143074 17 24727848 to 24727863 15 + TSS region transcription start site region 143074
Tssr143075 17 24728244 to 24728247 3 + TSS region transcription start site region 143075
Tssr143076 17 24728249 to 24728259 10 + TSS region transcription start site region 143076
Tssr143077 17 24728363 to 24728381 18 + TSS region transcription start site region 143077
Tssr143078 17 24730888 to 24730903 15 + TSS region transcription start site region 143078
Tssr5036 17 24736371 to 24736377 6 - TSS region transcription start site region 5036
Cpgi8743 17 24736459 to 24736797 338 CpG island CpG island 8743
Tssr143079 17 24736639 to 24736658 19 + TSS region transcription start site region 143079
Msrb1 17 24736642 to 24742778 6136 + protein coding gene methionine sulfoxide reductase B1
Tssr143080 17 24736660 to 24736671 11 + TSS region transcription start site region 143080
Tssr143081 17 24736673 to 24736695 22 + TSS region transcription start site region 143081
Tssr146781 17 24737641 to 24737645 4 - TSS region transcription start site region 146781
Tssr143082 17 24740037 to 24740053 16 + TSS region transcription start site region 143082
Tssr143083 17 24740057 to 24740067 10 + TSS region transcription start site region 143083
Tssr143084 17 24742325 to 24742356 31 + TSS region transcription start site region 143084
Tssr143085 17 24742448 to 24742466 18 + TSS region transcription start site region 143085
Cpgi8744 17 24752322 to 24753648 1326 CpG island CpG island 8744
Tssr143086 17 24752941 to 24752954 13 + TSS region transcription start site region 143086
Tssr143087 17 24752980 to 24752994 14 + TSS region transcription start site region 143087
Hs3st6 17 24752988 to 24758684 5696 + protein coding gene heparan sulfate (glucosamine) 3-O-sulfotransferase 6
D17Jcs50 17 24767087 to 24767276 189 DNA segment DNA segment, Chr 17, John C. Schimenti 50
Gm50022 17 24779703 to 24781984 2281 + lincRNA gene predicted gene, 50022
Tssr143088 17 24779724 to 24779751 27 + TSS region transcription start site region 143088
Tssr143089 17 24779784 to 24779799 15 + TSS region transcription start site region 143089
Cpgi8745 17 24803911 to 24804938 1027 CpG island CpG island 8745
Tssr143090 17 24804291 to 24804309 18 + TSS region transcription start site region 143090
Meiob 17 24804301 to 24839790 35489 + protein coding gene meiosis specific with OB domains
Tssr143091 17 24804312 to 24804325 13 + TSS region transcription start site region 143091