Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:24490064-24610098

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Caskin1 17 24488601 to 24508671 20070 + protein coding gene CASK interacting protein 1
Cpgi8723 17 24504900 to 24505551 651 CpG island CpG island 8723
Cpgi8724 17 24506412 to 24507356 944 CpG island CpG island 8724
Traf7 17 24508850 to 24527938 19088 - protein coding gene TNF receptor-associated factor 7
Tssr146739 17 24514977 to 24515013 36 - TSS region transcription start site region 146739
Cpgi8725 17 24527565 to 24528252 687 CpG island CpG island 8725
Tssr146740 17 24527814 to 24527829 15 - TSS region transcription start site region 146740
Tssr146741 17 24527830 to 24527884 54 - TSS region transcription start site region 146741
Tssr146742 17 24527896 to 24527907 11 - TSS region transcription start site region 146742
Tssr146743 17 24527925 to 24527935 10 - TSS region transcription start site region 146743
Tssr146744 17 24527937 to 24527951 14 - TSS region transcription start site region 146744
Tssr143043 17 24528243 to 24528264 21 + TSS region transcription start site region 143043
Rab26os 17 24528251 to 24528744 493 + antisense lncRNA gene RAB26, member RAS oncogene family, opposite strand
Snord60 17 24528476 to 24528553 77 + snoRNA gene small nucleolar RNA, C/D box 60
Rab26 17 24529054 to 24533747 4693 - protein coding gene RAB26, member RAS oncogene family
Tssr143044 17 24529107 to 24529108 1 + TSS region transcription start site region 143044
Cpgi8726 17 24533057 to 24533995 938 CpG island CpG island 8726
Tssr146745 17 24533709 to 24533732 23 - TSS region transcription start site region 146745
Gm33508 17 24533862 to 24546531 12669 + lncRNA gene predicted gene, 33508
Tssr143045 17 24533885 to 24533900 15 + TSS region transcription start site region 143045
Cpgi8727 17 24544753 to 24544914 161 CpG island CpG island 8727
Tssr143046 17 24548667 to 24548694 27 + TSS region transcription start site region 143046
Tssr143047 17 24548704 to 24548713 9 + TSS region transcription start site region 143047
Tssr143048 17 24549121 to 24549141 20 + TSS region transcription start site region 143048
Cpgi8728 17 24549563 to 24551086 1523 CpG island CpG island 8728
Pkd1 17 24549950 to 24596514 46564 + protein coding gene polycystin 1, transient receptor poteintial channel interacting
Tssr143049 17 24550025 to 24550033 8 + TSS region transcription start site region 143049
Tssr143050 17 24550045 to 24550062 17 + TSS region transcription start site region 143050
Tssr143051 17 24550064 to 24550098 34 + TSS region transcription start site region 143051
Tssr143052 17 24550103 to 24550116 13 + TSS region transcription start site region 143052
Tssr5033 17 24593139 to 24593152 13 + TSS region transcription start site region 5033
Gm24589 17 24594978 to 24595071 93 + miRNA gene predicted gene, 24589
Tsc2 17 24595816 to 24632627 36811 - protein coding gene tuberous sclerosis 2
Cpgi8729 17 24596821 to 24596981 160 CpG island CpG island 8729
Tssr146746 17 24599178 to 24599215 37 - TSS region transcription start site region 146746
Tssr146747 17 24608983 to 24609010 27 - TSS region transcription start site region 146747