Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:24028089-24168094

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8704 17 24030574 to 24031280 706 CpG island CpG island 8704
Cpgi8705 17 24031311 to 24031707 396 CpG island CpG island 8705
Tssr146688 17 24032329 to 24032342 13 - TSS region transcription start site region 146688
Tssr143000 17 24035325 to 24035333 8 + TSS region transcription start site region 143000
Tssr143001 17 24038223 to 24038228 5 + TSS region transcription start site region 143001
Tssr143002 17 24038236 to 24038249 13 + TSS region transcription start site region 143002
Prss27 17 24038243 to 24045949 7706 + protein coding gene protease, serine 27
Kctd5 17 24047734 to 24073485 25751 - protein coding gene potassium channel tetramerisation domain containing 5
D17Ertd262e 17 24052709 to 24052914 205 DNA segment DNA segment, Chr 17, ERATO Doi 262, expressed
Cpgi8706 17 24072956 to 24073745 789 CpG island CpG island 8706
Tssr146689 17 24073257 to 24073276 19 - TSS region transcription start site region 146689
Tssr146690 17 24073428 to 24073474 46 - TSS region transcription start site region 146690
Tssr146691 17 24073479 to 24073490 11 - TSS region transcription start site region 146691
Pdpk1 17 24073680 to 24150924 77244 - protein coding gene 3-phosphoinositide dependent protein kinase 1
Tssr146692 17 24078852 to 24078874 22 - TSS region transcription start site region 146692
Gm50071 17 24086864 to 24089879 3015 + antisense lncRNA gene predicted gene, 50071
Tssr146693 17 24097114 to 24097124 10 - TSS region transcription start site region 146693
Tssr146694 17 24098089 to 24098094 5 - TSS region transcription start site region 146694
Cpgi8707 17 24140887 to 24141966 1079 CpG island CpG island 8707
Tssr143003 17 24140915 to 24140936 21 + TSS region transcription start site region 143003
Tssr146695 17 24141542 to 24141591 49 - TSS region transcription start site region 146695
Gm33409 17 24141642 to 24142598 956 + lncRNA gene predicted gene, 33409
Gm50070 17 24145599 to 24147046 1447 - sense intronic lncRNA gene predicted gene, 50070
Tssr146696 17 24150866 to 24150881 15 - TSS region transcription start site region 146696
Tssr146697 17 24150886 to 24150907 21 - TSS region transcription start site region 146697
Tssr146698 17 24150910 to 24150928 18 - TSS region transcription start site region 146698
Tssr146699 17 24150942 to 24150950 8 - TSS region transcription start site region 146699
Cpgi8708 17 24151976 to 24152457 481 CpG island CpG island 8708
Tssr143004 17 24152089 to 24152100 11 + TSS region transcription start site region 143004
Amdhd2 17 24155833 to 24163733 7900 - protein coding gene amidohydrolase domain containing 2
Tssr143005 17 24162304 to 24162323 19 + TSS region transcription start site region 143005
Tssr143006 17 24162820 to 24162846 26 + TSS region transcription start site region 143006
Cpgi8709 17 24162933 to 24163885 952 CpG island CpG island 8709
Tssr146700 17 24163618 to 24163629 11 - TSS region transcription start site region 146700
Tssr146701 17 24163645 to 24163656 11 - TSS region transcription start site region 146701
Tssr146702 17 24163668 to 24163771 103 - TSS region transcription start site region 146702
Atp6v0c 17 24163866 to 24169429 5563 - protein coding gene ATPase, H+ transporting, lysosomal V0 subunit C
Tssr146703 17 24165044 to 24165067 23 - TSS region transcription start site region 146703
Tssr143007 17 24165258 to 24165269 11 + TSS region transcription start site region 143007
Tssr146704 17 24167430 to 24167437 7 - TSS region transcription start site region 146704