Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:23607197-23677213

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zscan10 17 23600856 to 23611019 10163 + protein coding gene zinc finger and SCAN domain containing 10
Cpgi8677 17 23609525 to 23610917 1392 CpG island CpG island 8677
Tssr142934 17 23610467 to 23610489 22 + TSS region transcription start site region 142934
Tssr146617 17 23610639 to 23610655 16 - TSS region transcription start site region 146617
Tssr142935 17 23617303 to 23617308 5 + TSS region transcription start site region 142935
Gm7912 17 23619236 to 23620900 1664 - pseudogene predicted gene 7912
Tssr146618 17 23620431 to 23620446 15 - TSS region transcription start site region 146618
Tssr142936 17 23620763 to 23620785 22 + TSS region transcription start site region 142936
Mmp25 17 23629169 to 23645269 16100 - protein coding gene matrix metallopeptidase 25
Cpgi8678 17 23630352 to 23630526 174 CpG island CpG island 8678
Gm49935 17 23636596 to 23636739 143 + pseudogene predicted gene, 49935
Tssr146619 17 23641723 to 23641766 43 - TSS region transcription start site region 146619
Tssr142937 17 23642197 to 23642213 16 + TSS region transcription start site region 142937
Gm7773 17 23642237 to 23643144 907 + pseudogene predicted gene 7773
Cpgi8679 17 23644548 to 23645471 923 CpG island CpG island 8679
Tssr146620 17 23644953 to 23644958 5 - TSS region transcription start site region 146620
Tssr146621 17 23644979 to 23644996 17 - TSS region transcription start site region 146621
Tssr146622 17 23644999 to 23645037 38 - TSS region transcription start site region 146622
Tssr146623 17 23645047 to 23645055 8 - TSS region transcription start site region 146623
Tssr146624 17 23645066 to 23645073 7 - TSS region transcription start site region 146624
Tssr146625 17 23645232 to 23645261 29 - TSS region transcription start site region 146625
Tssr146626 17 23645264 to 23645309 45 - TSS region transcription start site region 146626
Cpgi8680 17 23660406 to 23661086 680 CpG island CpG island 8680
Tssr142938 17 23660477 to 23660525 48 + TSS region transcription start site region 142938
Bicdl2 17 23660506 to 23668621 8115 + protein coding gene BICD family like cargo adaptor 2
Tssr142939 17 23665010 to 23665016 6 + TSS region transcription start site region 142939
Cpgi8681 17 23665370 to 23665567 197 CpG island CpG island 8681
Thoc6 17 23668614 to 23673882 5268 - protein coding gene THO complex 6
Tssr146627 17 23669921 to 23669938 17 - TSS region transcription start site region 146627
Tssr146628 17 23669946 to 23669967 21 - TSS region transcription start site region 146628
Tssr146629 17 23669969 to 23670004 35 - TSS region transcription start site region 146629
Tssr5030 17 23670009 to 23670010 1 - TSS region transcription start site region 5030
Tssr146630 17 23670785 to 23670792 7 - TSS region transcription start site region 146630
Tssr146631 17 23670863 to 23670873 10 - TSS region transcription start site region 146631
Tssr146632 17 23670890 to 23670913 23 - TSS region transcription start site region 146632
Tssr146633 17 23670924 to 23670941 17 - TSS region transcription start site region 146633
Tssr146634 17 23670943 to 23670944 1 - TSS region transcription start site region 146634
Cpgi8682 17 23673381 to 23674113 732 CpG island CpG island 8682
Tssr146635 17 23673557 to 23673577 20 - TSS region transcription start site region 146635
Tssr142940 17 23673581 to 23673652 71 + TSS region transcription start site region 142940
Hcfc1r1 17 23673596 to 23675227 1631 + protein coding gene host cell factor C1 regulator 1 (XPO1-dependent)
Tssr146636 17 23673825 to 23673887 62 - TSS region transcription start site region 146636
Tssr142941 17 23673898 to 23673987 89 + TSS region transcription start site region 142941
Tssr142942 17 23673990 to 23674001 11 + TSS region transcription start site region 142942
Pbft7 17 23674962 to 23674962 0 QTL percent body fat 7
Tssr146637 17 23675059 to 23675104 45 - TSS region transcription start site region 146637
Tnfrsf12a 17 23675445 to 23677449 2004 - protein coding gene tumor necrosis factor receptor superfamily, member 12a
Tssr146638 17 23675851 to 23675888 37 - TSS region transcription start site region 146638
Cpgi8683 17 23676440 to 23677628 1188 CpG island CpG island 8683
Tssr146639 17 23676562 to 23676583 21 - TSS region transcription start site region 146639
Tssr146640 17 23676587 to 23676629 42 - TSS region transcription start site region 146640
Tssr146641 17 23676641 to 23676646 5 - TSS region transcription start site region 146641
Tssr146642 17 23676660 to 23676684 24 - TSS region transcription start site region 146642