Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:23534269-23594299

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
n-TKctt12 17 23535332 to 23535404 72 - tRNA gene nuclear encoded tRNA lysine 12 (anticodon CTT)
Gm41543 17 23537670 to 23538674 1004 - lncRNA gene predicted gene, 41543
Cpgi8668 17 23537840 to 23538270 430 CpG island CpG island 8668
n-TPtgg1 17 23538766 to 23538837 71 - tRNA gene nuclear encoded tRNA proline 1 (anticodon TGG)
n-TPcgg1 17 23540915 to 23540986 71 + tRNA gene nuclear encoded tRNA proline 1 (anticodon CGG)
Cpgi8669 17 23546420 to 23547285 865 CpG island CpG island 8669
n-TPtgg6 17 23546476 to 23546547 71 - tRNA gene nuclear encoded tRNA proline 6 (anticodon TGG)
n-TKctt14 17 23547360 to 23547432 72 + tRNA gene nuclear encoded tRNA lysine 14 (anticodon CTT)
n-TRcct2 17 23548768 to 23548840 72 - tRNA gene nuclear encoded tRNA arginine 2 (anticodon CCT)
Cpgi8670 17 23548841 to 23549111 270 CpG island CpG island 8670
n-TRccg2 17 23550263 to 23550335 72 - tRNA gene nuclear encoded tRNA arginine 2 (anticodon CCG)
Cpgi8671 17 23550715 to 23551100 385 CpG island CpG island 8671
6330415G19Rik 17 23550799 to 23565291 14492 + antisense lncRNA gene RIKEN cDNA 6330415G19 gene
Casp16 17 23551080 to 23555330 4250 - polymorphic pseudogene caspase 16, apoptosis-related cysteine peptidase
Zfp213 17 23556767 to 23564226 7459 - protein coding gene zinc finger protein 213
Gm26695 17 23556769 to 23558313 1544 + lincRNA gene predicted gene, 26695
Cpgi8672 17 23563741 to 23564614 873 CpG island CpG island 8672
Tssr146614 17 23564117 to 23564161 44 - TSS region transcription start site region 146614
Tssr142923 17 23564269 to 23564299 30 + TSS region transcription start site region 142923
Gm49092 17 23572492 to 23573427 935 - lincRNA gene predicted gene, 49092
Zfp13 17 23575844 to 23599487 23643 - protein coding gene zinc finger protein 13
Cpgi8673 17 23575976 to 23576911 935 CpG island CpG island 8673
Cpgi8674 17 23585674 to 23586129 455 CpG island CpG island 8674
Tssr146615 17 23586214 to 23586269 55 - TSS region transcription start site region 146615
Cpgi8675 17 23592469 to 23593099 630 CpG island CpG island 8675