Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:21278748-21504265

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26384 17 21284103 to 21284212 109 - miRNA gene predicted gene, 26384
Vmn1r236 17 21286533 to 21287653 1120 + protein coding gene vomeronasal 1 receptor 236
Vmn1r237 17 21314017 to 21314886 869 + protein coding gene vomeronasal 1 receptor 237
Vmn1r-ps150 17 21323031 to 21323764 733 - pseudogene vomeronasal 1 receptor, pseudogene 150
Cpgi8652 17 21370049 to 21370488 439 CpG island CpG island 8652
Gm18269 17 21374638 to 21376348 1710 + pseudogene predicted gene, 18269
Cpgi8653 17 21383639 to 21383886 247 CpG island CpG island 8653
Tssr142873 17 21383725 to 21383766 41 + TSS region transcription start site region 142873
Zfp677 17 21383748 to 21399265 15517 + protein coding gene zinc finger protein 677
Gm18519 17 21394078 to 21395117 1039 - pseudogene predicted gene, 18519
Gm49691 17 21422649 to 21450267 27618 - antisense lncRNA gene predicted gene, 49691
Zfp54 17 21423227 to 21435384 12157 + protein coding gene zinc finger protein 54
Tssr5027 17 21423232 to 21423264 32 + TSS region transcription start site region 5027
Tssr142874 17 21423486 to 21423516 30 + TSS region transcription start site region 142874
D17Jcs130 17 21428496 to 21428680 184 DNA segment DNA segment, Chr 17, John C. Schimenti 130
Tssr146589 17 21450256 to 21450273 17 - TSS region transcription start site region 146589
Cpgi8654 17 21450256 to 21450693 437 CpG island CpG island 8654
Tssr142875 17 21450361 to 21450397 36 + TSS region transcription start site region 142875
Zfp51 17 21450374 to 21465587 15213 + protein coding gene zinc finger protein 51
Tssr142876 17 21450436 to 21450447 11 + TSS region transcription start site region 142876
Tssr146590 17 21463452 to 21463457 5 - TSS region transcription start site region 146590
Tssr146591 17 21471606 to 21471609 3 - TSS region transcription start site region 146591
Tssr142877 17 21473843 to 21473866 23 + TSS region transcription start site region 142877
Tssr142878 17 21474249 to 21474273 24 + TSS region transcription start site region 142878
Tssr142879 17 21474907 to 21474922 15 + TSS region transcription start site region 142879
Gm26753 17 21485177 to 21488875 3698 - lincRNA gene predicted gene, 26753
Cpgi8655 17 21488750 to 21489381 631 CpG island CpG island 8655
Tssr142880 17 21488982 to 21489060 78 + TSS region transcription start site region 142880
Zfp53 17 21488998 to 21510473 21475 + protein coding gene zinc finger protein 53
Tssr142881 17 21489077 to 21489088 11 + TSS region transcription start site region 142881
Tssr142882 17 21489091 to 21489117 26 + TSS region transcription start site region 142882
Tssr142883 17 21489200 to 21489222 22 + TSS region transcription start site region 142883
Tssr142884 17 21503815 to 21503818 3 + TSS region transcription start site region 142884