Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:21028826-21429816

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp160 17 21008941 to 21028857 19916 + protein coding gene zinc finger protein 160
Gm6809 17 21031848 to 21042410 10562 + pseudogene predicted gene 6809
Gm5681 17 21059244 to 21060776 1532 - pseudogene predicted gene 5681
Vmn1r-ps146 17 21080134 to 21080658 524 - pseudogene vomeronasal 1 receptor, pseudogene 146
Gm5092 17 21091208 to 21103347 12139 + lincRNA gene predicted gene 5092
Tssr142872 17 21091220 to 21091228 8 + TSS region transcription start site region 142872
Gm6811 17 21093172 to 21094704 1532 + pseudogene predicted gene 6811
Gm7732 17 21129351 to 21130877 1526 + pseudogene predicted gene 7732
Gm7736 17 21152562 to 21154088 1526 + pseudogene predicted gene 7736
Gm7740 17 21175779 to 21177305 1526 + pseudogene predicted gene 7740
Gm7742 17 21198952 to 21200478 1526 + pseudogene predicted gene 7742
Gm41539 17 21201379 to 21203659 2280 + lncRNA gene predicted gene, 41539
D17Jcs129 17 21216546 to 21216718 172 DNA segment DNA segment, Chr 17, John C. Schimenti 129
Vmn1r-ps147 17 21225478 to 21225990 512 - pseudogene vomeronasal 1 receptor, pseudogene 147
Vmn1r234 17 21228826 to 21229815 989 + protein coding gene vomeronasal 1 receptor 234
Vmn1r-ps148 17 21244841 to 21245295 454 + pseudogene vomeronasal 1 receptor, pseudogene 148
Vmn1r235 17 21260427 to 21262863 2436 + protein coding gene vomeronasal 1 receptor 235
Vmn1r-ps149 17 21269288 to 21269470 182 - pseudogene vomeronasal 1 receptor, pseudogene 149
Gm26384 17 21284103 to 21284212 109 - miRNA gene predicted gene, 26384
Vmn1r236 17 21286533 to 21287653 1120 + protein coding gene vomeronasal 1 receptor 236
Vmn1r237 17 21314017 to 21314886 869 + protein coding gene vomeronasal 1 receptor 237
Vmn1r-ps150 17 21323031 to 21323764 733 - pseudogene vomeronasal 1 receptor, pseudogene 150
Cpgi8652 17 21370049 to 21370488 439 CpG island CpG island 8652
Gm18269 17 21374638 to 21376348 1710 + pseudogene predicted gene, 18269
Cpgi8653 17 21383639 to 21383886 247 CpG island CpG island 8653
Tssr142873 17 21383725 to 21383766 41 + TSS region transcription start site region 142873
Zfp677 17 21383748 to 21399265 15517 + protein coding gene zinc finger protein 677
Gm18519 17 21394078 to 21395117 1039 - pseudogene predicted gene, 18519
Gm49691 17 21422649 to 21450267 27618 - antisense lncRNA gene predicted gene, 49691
Zfp54 17 21423227 to 21435384 12157 + protein coding gene zinc finger protein 54
Tssr5027 17 21423232 to 21423264 32 + TSS region transcription start site region 5027
Tssr142874 17 21423486 to 21423516 30 + TSS region transcription start site region 142874
D17Jcs130 17 21428496 to 21428680 184 DNA segment DNA segment, Chr 17, John C. Schimenti 130