Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:19187231-20002317

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Jcs9 17 19204259 to 19204504 245 DNA segment DNA segment, Chr 17, John C. Schimenti 9
Gm49753 17 19257930 to 19277565 19635 + lincRNA gene predicted gene, 49753
Gm49752 17 19277337 to 19360785 83448 + pseudogene predicted gene, 49752
Gm6759 17 19277337 to 19277968 631 + pseudogene predicted gene 6759
Vmn2r-ps120 17 19279322 to 19304478 25156 + pseudogene vomeronasal 2, receptor, pseudogene 120
Gm7605 17 19360108 to 19360912 804 + pseudogene predicted gene 7605
D17Jcs8 17 19360761 to 19361021 260 DNA segment DNA segment, Chr 17, John C. Schimenti 8
Vmn2r99 17 19362135 to 19394590 32455 + protein coding gene vomeronasal 2, receptor 99
4930549P19Rik 17 19415431 to 19490072 74641 + lincRNA gene RIKEN cDNA 4930549P19 gene
Tssr142857 17 19435331 to 19435334 3 + TSS region transcription start site region 142857
Tssr142858 17 19445236 to 19445237 1 + TSS region transcription start site region 142858
Vmn2r-ps121 17 19453325 to 19454575 1250 + pseudogene vomeronasal 2, receptor, pseudogene 121
Tssr146584 17 19487359 to 19487394 35 - TSS region transcription start site region 146584
Vmn2r100 17 19504811 to 19532060 27249 + protein coding gene vomeronasal 2, receptor 100
Gm18710 17 19532724 to 19533266 542 + pseudogene predicted gene, 18710
Tssr146585 17 19574355 to 19574384 29 - TSS region transcription start site region 146585
Tssr146586 17 19574385 to 19574390 5 - TSS region transcription start site region 146586
Vmn2r101 17 19577231 to 19612317 35086 + protein coding gene vomeronasal 2, receptor 101
Tssr146587 17 19629399 to 19629401 2 - TSS region transcription start site region 146587
Vmn2r102 17 19660399 to 19694748 34349 + protein coding gene vomeronasal 2, receptor 102
D17Jcs6 17 19703707 to 19703953 246 DNA segment DNA segment, Chr 17, John C. Schimenti 6
Vmn2r-ps122 17 19727139 to 19728044 905 + pseudogene vomeronasal 2, receptor, pseudogene 122
Vmn2r103 17 19773363 to 19812536 39173 + protein coding gene vomeronasal 2, receptor 103
Vmn2r-ps123 17 19838565 to 19874206 35641 + pseudogene vomeronasal 2, receptor, pseudogene 123
Vmn2r-ps124 17 19937213 to 19938078 865 + pseudogene vomeronasal 2, receptor, pseudogene 124
Vmn2r-ps125 17 19986880 to 19987797 917 - pseudogene vomeronasal 2, receptor, pseudogene 125
Tssr5025 17 19988051 to 19988054 3 + TSS region transcription start site region 5025