Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:19012135-19744590

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr142856 17 19031812 to 19031817 5 + TSS region transcription start site region 142856
Vmn2r98 17 19053493 to 19081311 27818 + protein coding gene vomeronasal 2, receptor 98
D17Jcs88 17 19060002 to 19060201 199 DNA segment DNA segment, Chr 17, John C. Schimenti 88
Vmn2r-ps119 17 19141468 to 19176742 35274 + pseudogene vomeronasal 2, receptor, pseudogene 119
D17Jcs10 17 19144070 to 19144378 308 DNA segment DNA segment, Chr 17, John C. Schimenti 10
D17Jcs9 17 19204259 to 19204504 245 DNA segment DNA segment, Chr 17, John C. Schimenti 9
Gm49753 17 19257930 to 19277565 19635 + lincRNA gene predicted gene, 49753
Gm49752 17 19277337 to 19360785 83448 + pseudogene predicted gene, 49752
Gm6759 17 19277337 to 19277968 631 + pseudogene predicted gene 6759
Vmn2r-ps120 17 19279322 to 19304478 25156 + pseudogene vomeronasal 2, receptor, pseudogene 120
Gm7605 17 19360108 to 19360912 804 + pseudogene predicted gene 7605
D17Jcs8 17 19360761 to 19361021 260 DNA segment DNA segment, Chr 17, John C. Schimenti 8
Vmn2r99 17 19362135 to 19394590 32455 + protein coding gene vomeronasal 2, receptor 99
4930549P19Rik 17 19415431 to 19490072 74641 + lincRNA gene RIKEN cDNA 4930549P19 gene
Tssr142857 17 19435331 to 19435334 3 + TSS region transcription start site region 142857
Tssr142858 17 19445236 to 19445237 1 + TSS region transcription start site region 142858
Vmn2r-ps121 17 19453325 to 19454575 1250 + pseudogene vomeronasal 2, receptor, pseudogene 121
Tssr146584 17 19487359 to 19487394 35 - TSS region transcription start site region 146584
Vmn2r100 17 19504811 to 19532060 27249 + protein coding gene vomeronasal 2, receptor 100
Gm18710 17 19532724 to 19533266 542 + pseudogene predicted gene, 18710
Tssr146585 17 19574355 to 19574384 29 - TSS region transcription start site region 146585
Tssr146586 17 19574385 to 19574390 5 - TSS region transcription start site region 146586
Vmn2r101 17 19577231 to 19612317 35086 + protein coding gene vomeronasal 2, receptor 101
Tssr146587 17 19629399 to 19629401 2 - TSS region transcription start site region 146587
Vmn2r102 17 19660399 to 19694748 34349 + protein coding gene vomeronasal 2, receptor 102
D17Jcs6 17 19703707 to 19703953 246 DNA segment DNA segment, Chr 17, John C. Schimenti 6
Vmn2r-ps122 17 19727139 to 19728044 905 + pseudogene vomeronasal 2, receptor, pseudogene 122