Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:18812724-20253266

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn2r-ps117 17 18822560 to 18838742 16182 + pseudogene vomeronasal 2, receptor, pseudogene 117
Vmn2r97 17 18914322 to 18948071 33749 + protein coding gene vomeronasal 2, receptor 97
Gm41538 17 18954534 to 18969041 14507 - lncRNA gene predicted gene, 41538
Tssr142855 17 18958079 to 18958084 5 + TSS region transcription start site region 142855
Tssr146581 17 18959097 to 18959100 3 - TSS region transcription start site region 146581
Tssr146582 17 18968981 to 18968998 17 - TSS region transcription start site region 146582
Tssr146583 17 18969027 to 18969060 33 - TSS region transcription start site region 146583
Vmn2r-ps118 17 18989618 to 18990880 1262 + pseudogene vomeronasal 2, receptor, pseudogene 118
Tssr142856 17 19031812 to 19031817 5 + TSS region transcription start site region 142856
Vmn2r98 17 19053493 to 19081311 27818 + protein coding gene vomeronasal 2, receptor 98
D17Jcs88 17 19060002 to 19060201 199 DNA segment DNA segment, Chr 17, John C. Schimenti 88
Vmn2r-ps119 17 19141468 to 19176742 35274 + pseudogene vomeronasal 2, receptor, pseudogene 119
D17Jcs10 17 19144070 to 19144378 308 DNA segment DNA segment, Chr 17, John C. Schimenti 10
D17Jcs9 17 19204259 to 19204504 245 DNA segment DNA segment, Chr 17, John C. Schimenti 9
Gm49753 17 19257930 to 19277565 19635 + lincRNA gene predicted gene, 49753
Gm49752 17 19277337 to 19360785 83448 + pseudogene predicted gene, 49752
Gm6759 17 19277337 to 19277968 631 + pseudogene predicted gene 6759
Vmn2r-ps120 17 19279322 to 19304478 25156 + pseudogene vomeronasal 2, receptor, pseudogene 120
Gm7605 17 19360108 to 19360912 804 + pseudogene predicted gene 7605
D17Jcs8 17 19360761 to 19361021 260 DNA segment DNA segment, Chr 17, John C. Schimenti 8
Vmn2r99 17 19362135 to 19394590 32455 + protein coding gene vomeronasal 2, receptor 99
4930549P19Rik 17 19415431 to 19490072 74641 + lincRNA gene RIKEN cDNA 4930549P19 gene
Tssr142857 17 19435331 to 19435334 3 + TSS region transcription start site region 142857
Tssr142858 17 19445236 to 19445237 1 + TSS region transcription start site region 142858
Vmn2r-ps121 17 19453325 to 19454575 1250 + pseudogene vomeronasal 2, receptor, pseudogene 121
Tssr146584 17 19487359 to 19487394 35 - TSS region transcription start site region 146584
Vmn2r100 17 19504811 to 19532060 27249 + protein coding gene vomeronasal 2, receptor 100
Gm18710 17 19532724 to 19533266 542 + pseudogene predicted gene, 18710
Tssr146585 17 19574355 to 19574384 29 - TSS region transcription start site region 146585
Tssr146586 17 19574385 to 19574390 5 - TSS region transcription start site region 146586
Vmn2r101 17 19577231 to 19612317 35086 + protein coding gene vomeronasal 2, receptor 101
Tssr146587 17 19629399 to 19629401 2 - TSS region transcription start site region 146587
Vmn2r102 17 19660399 to 19694748 34349 + protein coding gene vomeronasal 2, receptor 102
D17Jcs6 17 19703707 to 19703953 246 DNA segment DNA segment, Chr 17, John C. Schimenti 6
Vmn2r-ps122 17 19727139 to 19728044 905 + pseudogene vomeronasal 2, receptor, pseudogene 122
Vmn2r103 17 19773363 to 19812536 39173 + protein coding gene vomeronasal 2, receptor 103
Vmn2r-ps123 17 19838565 to 19874206 35641 + pseudogene vomeronasal 2, receptor, pseudogene 123
Vmn2r-ps124 17 19937213 to 19938078 865 + pseudogene vomeronasal 2, receptor, pseudogene 124
Vmn2r-ps125 17 19986880 to 19987797 917 - pseudogene vomeronasal 2, receptor, pseudogene 125
Tssr5025 17 19988051 to 19988054 3 + TSS region transcription start site region 5025
Vmn2r104 17 20029425 to 20048205 18780 - protein coding gene vomeronasal 2, receptor 104
Tssr142859 17 20049000 to 20049037 37 + TSS region transcription start site region 142859
Gm3547 17 20049043 to 20049287 244 + pseudogene predicted gene 3547
Vmn2r-ps126 17 20079965 to 20082301 2336 + pseudogene vomeronasal 2, receptor, pseudogene 126
D17Dcr32 17 20110196 to 20110291 95 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 32
Fpr-rs7 17 20113210 to 20114226 1016 - protein coding gene formyl peptide receptor, related sequence 7
Vmn1r-ps139 17 20121953 to 20122553 600 - pseudogene vomeronasal 1 receptor, pseudogene 139
D17Jcs37 17 20127840 to 20128057 217 DNA segment DNA segment, Chr 17, John C. Schimenti 37
D17Mit197 17 20127913 to 20128037 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 197
Leci2 17 20127913 to 20128037 124 QTL leukocyte endothelial cell interactions 2
Fpr-rs6 17 20182078 to 20183097 1019 - protein coding gene formyl peptide receptor, related sequence 6
Vmn1r-ps140 17 20191655 to 20192460 805 - pseudogene vomeronasal 1 receptor, pseudogene 140
Vmn2r105 17 20208230 to 20234872 26642 - protein coding gene vomeronasal 2, receptor 105
D17Jcs3 17 20214346 to 20214585 239 DNA segment DNA segment, Chr 17, John C. Schimenti 3