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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:17903743-19084958

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr142836 17 17904038 to 17904047 9 + TSS region transcription start site region 142836
Gm7531 17 17906549 to 17907275 726 - pseudogene predicted gene 7531
Tssr142837 17 17909467 to 17909468 1 + TSS region transcription start site region 142837
Cpgi8648 17 17909783 to 17910436 653 CpG island CpG island 8648
Tssr146578 17 17910195 to 17910219 24 - TSS region transcription start site region 146578
Tssr146579 17 17910244 to 17910273 29 - TSS region transcription start site region 146579
Gm9481 17 17910572 to 17913013 2441 + pseudogene predicted gene 9481
Gm7535 17 17911042 to 17912725 1683 - pseudogene predicted gene 7535
Tssr142838 17 17915914 to 17915947 33 + TSS region transcription start site region 142838
Tssr142839 17 17916184 to 17916196 12 + TSS region transcription start site region 142839
Tssr142840 17 17917484 to 17917495 11 + TSS region transcription start site region 142840
Tssr142841 17 17917575 to 17917586 11 + TSS region transcription start site region 142841
Tssr142842 17 17917788 to 17917802 14 + TSS region transcription start site region 142842
Tssr142843 17 17917830 to 17917839 9 + TSS region transcription start site region 142843
Tssr142844 17 17917862 to 17917868 6 + TSS region transcription start site region 142844
Tssr142845 17 17917877 to 17917889 12 + TSS region transcription start site region 142845
Gm5966 17 17920258 to 17921480 1222 + pseudogene predicted gene 5966
Tssr142846 17 17927993 to 17928022 29 + TSS region transcription start site region 142846
Tssr142847 17 17928229 to 17928239 10 + TSS region transcription start site region 142847
Tssr142848 17 17928278 to 17928304 26 + TSS region transcription start site region 142848
Tssr142849 17 17928338 to 17928381 43 + TSS region transcription start site region 142849
Tssr142850 17 17931997 to 17932008 11 + TSS region transcription start site region 142850
Tssr142851 17 17932292 to 17932319 27 + TSS region transcription start site region 142851
Tssr142852 17 17937758 to 17937778 20 + TSS region transcription start site region 142852
Tssr142853 17 17939583 to 17939603 20 + TSS region transcription start site region 142853
Tssr142854 17 17949945 to 17949980 35 + TSS region transcription start site region 142854
Fpr3 17 17970458 to 17971677 1219 + protein coding gene formyl peptide receptor 3
Fpr-rs5 17 17990498 to 17991464 966 + pseudogene formyl peptide receptor, related sequence 5
Fpr-rs4 17 18021733 to 18022704 971 + protein coding gene formyl peptide receptor, related sequence 4
Vmn2r124 17 18049484 to 18074220 24736 + protein coding gene vomeronasal 2, receptor 124
Vmn2r91 17 18085057 to 18136643 51586 + protein coding gene vomeronasal 2, receptor 91
Vmn2r92 17 18151930 to 18185178 33248 + protein coding gene vomeronasal 2, receptor 92
Gm29986 17 18219105 to 18234716 15611 - protein coding gene predicted gene, 29986
Tssr146580 17 18231552 to 18231559 7 - TSS region transcription start site region 146580
Vmn2r94 17 18243570 to 18277566 33996 - protein coding gene vomeronasal 2, receptor 94
Vmn2r93 17 18298281 to 18326441 28160 + protein coding gene vomeronasal 2, receptor 93
Vmn2r95 17 18424104 to 18452324 28220 + protein coding gene vomeronasal 2, receptor 95
Gm49963 17 18476532 to 18476654 122 - pseudogene predicted gene, 49963
Vmn2r-ps114 17 18493743 to 18494958 1215 + pseudogene vomeronasal 2, receptor, pseudogene 114
D17Mit59 17 18502799 to 18502945 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 59
Vmn2r96 17 18573255 to 18598157 24902 + protein coding gene vomeronasal 2, receptor 96
Vmn2r-ps115 17 18694403 to 18707120 12717 + pseudogene vomeronasal 2, receptor, pseudogene 115
Vmn2r-ps116 17 18763265 to 18763390 125 + pseudogene vomeronasal 2, receptor, pseudogene 116
Vmn2r-ps117 17 18822560 to 18838742 16182 + pseudogene vomeronasal 2, receptor, pseudogene 117
Vmn2r97 17 18914322 to 18948071 33749 + protein coding gene vomeronasal 2, receptor 97
Gm41538 17 18954534 to 18969041 14507 - lncRNA gene predicted gene, 41538
Tssr142855 17 18958079 to 18958084 5 + TSS region transcription start site region 142855
Tssr146581 17 18959097 to 18959100 3 - TSS region transcription start site region 146581
Tssr146582 17 18968981 to 18968998 17 - TSS region transcription start site region 146582
Tssr146583 17 18969027 to 18969060 33 - TSS region transcription start site region 146583
Vmn2r-ps118 17 18989618 to 18990880 1262 + pseudogene vomeronasal 2, receptor, pseudogene 118
Tssr142856 17 19031812 to 19031817 5 + TSS region transcription start site region 142856
Vmn2r98 17 19053493 to 19081311 27818 + protein coding gene vomeronasal 2, receptor 98
D17Jcs88 17 19060002 to 19060201 199 DNA segment DNA segment, Chr 17, John C. Schimenti 88