Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:17678132-17888417

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn2r90 17 17703941 to 17734167 30226 + protein coding gene vomeronasal 2, receptor 90
Gm23837 17 17783132 to 17783417 285 + unclassified non-coding RNA gene predicted gene, 23837
Tssr146565 17 17826861 to 17826872 11 - TSS region transcription start site region 146565
Cpgi8644 17 17826924 to 17827457 533 CpG island CpG island 8644
Tssr142801 17 17826947 to 17826964 17 + TSS region transcription start site region 142801
Tssr5018 17 17827093 to 17827121 28 + TSS region transcription start site region 5018
Tssr142802 17 17827134 to 17827163 29 + TSS region transcription start site region 142802
Spaca6 17 17827158 to 17843009 15851 + protein coding gene sperm acrosome associated 6
Mir99b 17 17830188 to 17830257 69 + miRNA gene microRNA 99b
Mirc9 17 17830188 to 17830879 691 complex/cluster/region microRNA cluster 9, including Mir99b through Mir125a
Gm25927 17 17830343 to 17830459 116 - miRNA gene predicted gene, 25927
Mirlet7e 17 17830352 to 17830444 92 + miRNA gene microRNA let7e
Tssr142803 17 17830620 to 17830634 14 + TSS region transcription start site region 142803
Mir125a 17 17830812 to 17830879 67 + miRNA gene microRNA 125a
Tssr142804 17 17830876 to 17830880 4 + TSS region transcription start site region 142804
Tssr142805 17 17831047 to 17831069 22 + TSS region transcription start site region 142805
Tssr142806 17 17831076 to 17831095 19 + TSS region transcription start site region 142806
Tssr142807 17 17831137 to 17831145 8 + TSS region transcription start site region 142807
Tssr142808 17 17831298 to 17831316 18 + TSS region transcription start site region 142808
Tssr5019 17 17831642 to 17831654 12 + TSS region transcription start site region 5019
Tssr5020 17 17832459 to 17832473 14 + TSS region transcription start site region 5020
Tssr142809 17 17832971 to 17832975 4 + TSS region transcription start site region 142809
Cpgi8645 17 17837716 to 17838628 912 CpG island CpG island 8645
Tssr142810 17 17838071 to 17838088 17 + TSS region transcription start site region 142810
Tssr146566 17 17838202 to 17838208 6 - TSS region transcription start site region 146566
Tssr142811 17 17838308 to 17838333 25 + TSS region transcription start site region 142811
Tssr142812 17 17838389 to 17838443 54 + TSS region transcription start site region 142812
Tssr142813 17 17838457 to 17838475 18 + TSS region transcription start site region 142813
Has1 17 17843323 to 17855205 11882 - protein coding gene hyaluronan synthase 1
Cpgi8646 17 17843925 to 17844304 379 CpG island CpG island 8646
Cpgi8647 17 17849899 to 17850644 745 CpG island CpG island 8647
Tssr142814 17 17850019 to 17850051 32 + TSS region transcription start site region 142814
Gm36907 17 17850134 to 17866291 16157 + lncRNA gene predicted gene, 36907
Tssr146567 17 17855200 to 17855205 5 - TSS region transcription start site region 146567
Tssr142815 17 17865451 to 17865471 20 + TSS region transcription start site region 142815
Tssr142816 17 17867055 to 17867062 7 + TSS region transcription start site region 142816
Tssr142817 17 17867339 to 17867350 11 + TSS region transcription start site region 142817
Tssr5021 17 17871141 to 17871150 9 + TSS region transcription start site region 5021
Tssr5022 17 17871165 to 17871173 8 + TSS region transcription start site region 5022
Tssr5023 17 17871694 to 17871707 13 - TSS region transcription start site region 5023
Tssr142818 17 17871963 to 17871972 9 + TSS region transcription start site region 142818
Tssr142819 17 17873739 to 17873745 6 + TSS region transcription start site region 142819
Fpr1 17 17876471 to 17883939 7468 - protein coding gene formyl peptide receptor 1
Tssr146568 17 17876668 to 17876680 12 - TSS region transcription start site region 146568
Tssr146569 17 17876706 to 17876718 12 - TSS region transcription start site region 146569
Tssr146570 17 17876991 to 17877002 11 - TSS region transcription start site region 146570
Tssr146571 17 17877018 to 17877031 13 - TSS region transcription start site region 146571
Tssr146572 17 17877105 to 17877125 20 - TSS region transcription start site region 146572
Tssr146573 17 17877535 to 17877552 17 - TSS region transcription start site region 146573
Tssr142820 17 17882874 to 17882912 38 + TSS region transcription start site region 142820
Tssr5024 17 17882948 to 17882979 31 + TSS region transcription start site region 5024
Tssr146574 17 17883920 to 17883954 34 - TSS region transcription start site region 146574
Tssr146575 17 17883963 to 17883974 11 - TSS region transcription start site region 146575
Tssr142821 17 17887093 to 17887135 42 + TSS region transcription start site region 142821
Tssr142822 17 17887807 to 17887818 11 + TSS region transcription start site region 142822
Fpr2 17 17887824 to 17893952 6128 + protein coding gene formyl peptide receptor 2
Tssr142823 17 17887826 to 17887837 11 + TSS region transcription start site region 142823
Tssr142824 17 17887840 to 17887865 25 + TSS region transcription start site region 142824