Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:16992141-17472147

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr142777 17 17005109 to 17005136 27 + TSS region transcription start site region 142777
Tssr142778 17 17064042 to 17064077 35 + TSS region transcription start site region 142778
Zfp960 17 17064113 to 17089628 25515 + protein coding gene zinc finger protein 960
Zfp97 17 17121415 to 17146831 25416 + protein coding gene zinc finger protein 97
Gm38396 17 17178908 to 17206397 27489 + unclassified gene predicted gene, 38396
Tssr146546 17 17196111 to 17196115 4 - TSS region transcription start site region 146546
Tssr142779 17 17232141 to 17232147 6 + TSS region transcription start site region 142779
Gm5165 17 17234872 to 17266063 31191 + lincRNA gene predicted gene 5165
Tssr142780 17 17234891 to 17234942 51 + TSS region transcription start site region 142780
Tssr142781 17 17294437 to 17294461 24 + TSS region transcription start site region 142781
Gm6712 17 17294443 to 17319511 25068 + lincRNA gene predicted gene 6712
Gm41536 17 17341804 to 17368813 27009 - lncRNA gene predicted gene, 41536
Oaz1-ps 17 17345456 to 17346140 684 - pseudogene ornithine decarboxylase antizyme 1, pseudogene
Cpgi8641 17 17345824 to 17346241 417 CpG island CpG island 8641
Gm36768 17 17369177 to 17374102 4925 - lncRNA gene predicted gene, 36768
Cpgi8642 17 17373840 to 17374708 868 CpG island CpG island 8642
Tssr146547 17 17374207 to 17374242 35 - TSS region transcription start site region 146547
Tssr142782 17 17374264 to 17374278 14 + TSS region transcription start site region 142782
Riok2 17 17374332 to 17394899 20567 + protein coding gene RIO kinase 2
Tssr142783 17 17374519 to 17374541 22 + TSS region transcription start site region 142783
Tssr142784 17 17374546 to 17374594 48 + TSS region transcription start site region 142784
Tssr142785 17 17374615 to 17374624 9 + TSS region transcription start site region 142785
Gm26873 17 17389943 to 17411993 22050 - antisense lncRNA gene predicted gene, 26873
Tssr142786 17 17402683 to 17402771 88 + TSS region transcription start site region 142786
Lix1 17 17402686 to 17459387 56701 + protein coding gene limb and CNS expressed 1
Tssr142787 17 17402818 to 17402829 11 + TSS region transcription start site region 142787
Tssr142788 17 17402852 to 17402863 11 + TSS region transcription start site region 142788
Tssr142789 17 17402865 to 17402910 45 + TSS region transcription start site region 142789
Tssr142790 17 17402916 to 17402921 5 + TSS region transcription start site region 142790
Tssr142791 17 17402926 to 17402941 15 + TSS region transcription start site region 142791
Tssr142792 17 17402969 to 17402979 10 + TSS region transcription start site region 142792
Tssr146548 17 17410850 to 17410858 8 - TSS region transcription start site region 146548
Tssr146549 17 17416413 to 17416418 5 - TSS region transcription start site region 146549
Tssr142793 17 17448860 to 17448884 24 + TSS region transcription start site region 142793
Tssr142794 17 17448894 to 17448924 30 + TSS region transcription start site region 142794