Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:16734042-17394077

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5223 17 16781621 to 16782887 1266 + pseudogene predicted gene 5223
D17Jcs80 17 16800850 to 16801042 192 DNA segment DNA segment, Chr 17, John C. Schimenti 80
Tssr146544 17 16819933 to 16819935 2 - TSS region transcription start site region 146544
Gm6705 17 16847395 to 16848079 684 + pseudogene predicted gene 6705
Gm49775 17 16868918 to 16869182 264 + pseudogene predicted gene, 49775
Tssr142774 17 16889254 to 16889263 9 + TSS region transcription start site region 142774
Gm7483 17 16889355 to 16890410 1055 + pseudogene predicted gene 7483
Tssr146545 17 16921323 to 16921362 39 - TSS region transcription start site region 146545
Tssr142775 17 16951522 to 16951553 31 + TSS region transcription start site region 142775
BC002059 17 16951539 to 16974157 22618 + lincRNA gene cDNA sequence BC002059
Tssr142776 17 16951556 to 16951589 33 + TSS region transcription start site region 142776
Tssr142777 17 17005109 to 17005136 27 + TSS region transcription start site region 142777
Tssr142778 17 17064042 to 17064077 35 + TSS region transcription start site region 142778
Zfp960 17 17064113 to 17089628 25515 + protein coding gene zinc finger protein 960
Zfp97 17 17121415 to 17146831 25416 + protein coding gene zinc finger protein 97
Gm38396 17 17178908 to 17206397 27489 + unclassified gene predicted gene, 38396
Tssr146546 17 17196111 to 17196115 4 - TSS region transcription start site region 146546
Tssr142779 17 17232141 to 17232147 6 + TSS region transcription start site region 142779
Gm5165 17 17234872 to 17266063 31191 + lincRNA gene predicted gene 5165
Tssr142780 17 17234891 to 17234942 51 + TSS region transcription start site region 142780
Tssr142781 17 17294437 to 17294461 24 + TSS region transcription start site region 142781
Gm6712 17 17294443 to 17319511 25068 + lincRNA gene predicted gene 6712
Gm41536 17 17341804 to 17368813 27009 - lncRNA gene predicted gene, 41536
Oaz1-ps 17 17345456 to 17346140 684 - pseudogene ornithine decarboxylase antizyme 1, pseudogene
Cpgi8641 17 17345824 to 17346241 417 CpG island CpG island 8641
Gm36768 17 17369177 to 17374102 4925 - lncRNA gene predicted gene, 36768
Cpgi8642 17 17373840 to 17374708 868 CpG island CpG island 8642
Tssr146547 17 17374207 to 17374242 35 - TSS region transcription start site region 146547
Tssr142782 17 17374264 to 17374278 14 + TSS region transcription start site region 142782
Riok2 17 17374332 to 17394899 20567 + protein coding gene RIO kinase 2
Tssr142783 17 17374519 to 17374541 22 + TSS region transcription start site region 142783
Tssr142784 17 17374546 to 17374594 48 + TSS region transcription start site region 142784
Tssr142785 17 17374615 to 17374624 9 + TSS region transcription start site region 142785
Gm26873 17 17389943 to 17411993 22050 - antisense lncRNA gene predicted gene, 26873