Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:15953411-17164187

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Jcs85 17 16008321 to 16008544 223 DNA segment DNA segment, Chr 17, John C. Schimenti 85
Gm49777 17 16163079 to 16163564 485 - pseudogene predicted gene, 49777
Gm49778 17 16163151 to 16166084 2933 + lincRNA gene predicted gene, 49778
D17Jcs84 17 16186658 to 16186832 174 DNA segment DNA segment, Chr 17, John C. Schimenti 84
Eosnp1 17 16189814 to 16189814 0 QTL percent eosinophils 1
Gm41534 17 16235526 to 16492056 256530 + lncRNA gene predicted gene, 41534
D17Jcs83 17 16317618 to 16317785 167 DNA segment DNA segment, Chr 17, John C. Schimenti 83
Gm46610 17 16320400 to 16320807 407 - pseudogene predicted gene, 46610
D17Mit165 17 16404719 to 16404842 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 165
D17Jcs82 17 16508771 to 16508961 190 DNA segment DNA segment, Chr 17, John C. Schimenti 82
Tssr142773 17 16557218 to 16557231 13 + TSS region transcription start site region 142773
Gm4786 17 16557246 to 16558043 797 + pseudogene predicted gene 4786
Gm17939 17 16558411 to 16559187 776 + pseudogene predicted gene, 17939
D17Jcs81 17 16615126 to 16615340 214 DNA segment DNA segment, Chr 17, John C. Schimenti 81
D17Mit213 17 16615193 to 16615316 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 213
Radpf1 17 16615193 to 33600869 16985676 QTL radiation pulmonary fibrosis 1
Gm3320 17 16669156 to 16670186 1030 - pseudogene predicted pseudogene 3320
Tssr146543 17 16669763 to 16669789 26 - TSS region transcription start site region 146543
Gm7477 17 16726453 to 16727116 663 + pseudogene predicted gene 7477
Gm5223 17 16781621 to 16782887 1266 + pseudogene predicted gene 5223
D17Jcs80 17 16800850 to 16801042 192 DNA segment DNA segment, Chr 17, John C. Schimenti 80
Tssr146544 17 16819933 to 16819935 2 - TSS region transcription start site region 146544
Gm6705 17 16847395 to 16848079 684 + pseudogene predicted gene 6705
Gm49775 17 16868918 to 16869182 264 + pseudogene predicted gene, 49775
Tssr142774 17 16889254 to 16889263 9 + TSS region transcription start site region 142774
Gm7483 17 16889355 to 16890410 1055 + pseudogene predicted gene 7483
Tssr146545 17 16921323 to 16921362 39 - TSS region transcription start site region 146545
Tssr142775 17 16951522 to 16951553 31 + TSS region transcription start site region 142775
BC002059 17 16951539 to 16974157 22618 + lincRNA gene cDNA sequence BC002059
Tssr142776 17 16951556 to 16951589 33 + TSS region transcription start site region 142776
Tssr142777 17 17005109 to 17005136 27 + TSS region transcription start site region 142777
Tssr142778 17 17064042 to 17064077 35 + TSS region transcription start site region 142778
Zfp960 17 17064113 to 17089628 25515 + protein coding gene zinc finger protein 960
Zfp97 17 17121415 to 17146831 25416 + protein coding gene zinc finger protein 97