Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:15646032-16016102

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Jcs22 17 15683013 to 15683226 213 DNA segment DNA segment, Chr 17, John C. Schimenti 22
5830433I10Rik 17 15702465 to 15704708 2243 - lncRNA gene RIKEN cDNA 5830433I10 gene
Cpgi8638 17 15704260 to 15706179 1919 CpG island CpG island 8638
Tssr146528 17 15704422 to 15704431 9 - TSS region transcription start site region 146528
Tssr146529 17 15704792 to 15704810 18 - TSS region transcription start site region 146529
Tssr142757 17 15704963 to 15704994 31 + TSS region transcription start site region 142757
Chd1 17 15704967 to 15772610 67643 + protein coding gene chromodomain helicase DNA binding protein 1
Tssr142758 17 15705002 to 15705033 31 + TSS region transcription start site region 142758
Tssr142759 17 15705097 to 15705142 45 + TSS region transcription start site region 142759
Tssr146530 17 15706112 to 15706133 21 - TSS region transcription start site region 146530
Tssr146531 17 15706144 to 15706163 19 - TSS region transcription start site region 146531
Tssr142760 17 15706551 to 15706561 10 + TSS region transcription start site region 142760
Tssr142761 17 15706577 to 15706586 9 + TSS region transcription start site region 142761
Tssr142762 17 15731839 to 15731855 16 + TSS region transcription start site region 142762
Tssr142763 17 15731970 to 15731983 13 + TSS region transcription start site region 142763
Tssr142764 17 15735758 to 15735807 49 + TSS region transcription start site region 142764
Tssr142765 17 15745782 to 15745787 5 + TSS region transcription start site region 142765
Tssr142766 17 15747798 to 15747813 15 + TSS region transcription start site region 142766
Tssr142767 17 15751314 to 15751318 4 + TSS region transcription start site region 142767
Tssr142768 17 15755019 to 15755058 39 + TSS region transcription start site region 142768
D17Jcs21 17 15756389 to 15756581 192 DNA segment DNA segment, Chr 17, John C. Schimenti 21
Tssr142769 17 15758574 to 15758585 11 + TSS region transcription start site region 142769
Tssr142770 17 15758626 to 15758638 12 + TSS region transcription start site region 142770
Tssr142771 17 15772289 to 15772293 4 + TSS region transcription start site region 142771
Tssr142772 17 15777568 to 15777571 3 + TSS region transcription start site region 142772
Rgmb 17 15804661 to 15831817 27156 - protein coding gene repulsive guidance molecule family member B
Tssr146532 17 15807080 to 15807094 14 - TSS region transcription start site region 146532
Cpgi8639 17 15825425 to 15827284 1859 CpG island CpG island 8639
Tssr146533 17 15826488 to 15826512 24 - TSS region transcription start site region 146533
Tssr146534 17 15826521 to 15826590 69 - TSS region transcription start site region 146534
Tssr146535 17 15829825 to 15829839 14 - TSS region transcription start site region 146535
Tssr146536 17 15829882 to 15829902 20 - TSS region transcription start site region 146536
Cpgi8640 17 15830361 to 15831424 1063 CpG island CpG island 8640
Tssr146537 17 15830786 to 15830797 11 - TSS region transcription start site region 146537
Tssr146538 17 15830804 to 15830816 12 - TSS region transcription start site region 146538
Tssr146539 17 15830830 to 15830849 19 - TSS region transcription start site region 146539
Tssr146540 17 15831032 to 15831102 70 - TSS region transcription start site region 146540
Tssr146541 17 15831172 to 15831195 23 - TSS region transcription start site region 146541
Tssr146542 17 15831228 to 15831251 23 - TSS region transcription start site region 146542
Gm3292 17 15833168 to 15833477 309 - pseudogene predicted gene 3292
Gm25598 17 15837549 to 15837655 106 - snRNA gene predicted gene, 25598
Eif3s6-ps3 17 15845280 to 15846628 1348 + pseudogene eukaryotic translation initiation factor 3, subunit 6, pseudogene 3
D17Mit261 17 15858247 to 15858421 174 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 261
Gm41533 17 15877081 to 15907917 30836 - lncRNA gene predicted gene, 41533
D17Jcs85 17 16008321 to 16008544 223 DNA segment DNA segment, Chr 17, John C. Schimenti 85