Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:15025082-15376274

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcte3 17 15027152 to 15041488 14336 - protein coding gene t-complex-associated testis expressed 3
Tssr146506 17 15041457 to 15041469 12 - TSS region transcription start site region 146506
Ermard 17 15041549 to 15090045 48496 + protein coding gene ER membrane associated RNA degradation
Gm35343 17 15046761 to 15055107 8346 - lncRNA gene predicted gene, 35343
D17Mit78 17 15061815 to 15061912 97 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 78
Gm41532 17 15080746 to 15086138 5392 + lncRNA gene predicted gene, 41532
Gm35203 17 15084317 to 15086185 1868 - lncRNA gene predicted gene, 35203
D17Jcs27 17 15143789 to 15144000 211 DNA segment DNA segment, Chr 17, John C. Schimenti 27
Gm35455 17 15152122 to 15172191 20069 + lincRNA gene predicted gene, 35455
Gm35502 17 15195082 to 15206274 11192 + lncRNA gene predicted gene, 35502
4930432N10Rik 17 15207601 to 15209388 1787 unclassified gene RIKEN cDNA 4930432N10 gene
Gm5091 17 15231585 to 15240783 9198 - lincRNA gene predicted gene 5091
Tssr146507 17 15239301 to 15239317 16 - TSS region transcription start site region 146507
Tssr146508 17 15240747 to 15240755 8 - TSS region transcription start site region 146508
Gm35576 17 15282286 to 15285416 3130 - lincRNA gene predicted gene, 35576
D17Aus17 17 15283650 to 15283904 254 DNA segment DNA segment, Chr 17, Austin 17
Gm7423 17 15321432 to 15321882 450 - pseudogene predicted gene 7423
Tssr142750 17 15327147 to 15327148 1 + TSS region transcription start site region 142750
Tssr146509 17 15329924 to 15329934 10 - TSS region transcription start site region 146509
Gm10510 17 15350813 to 15354461 3648 - lncRNA gene predicted gene 10510
Dll1 17 15367354 to 15376048 8694 - protein coding gene delta like canonical Notch ligand 1
Tssr146510 17 15368580 to 15368591 11 - TSS region transcription start site region 146510
Cpgi8629 17 15374527 to 15377243 2716 CpG island CpG island 8629
Tssr142751 17 15374626 to 15374637 11 + TSS region transcription start site region 142751
Tssr146511 17 15374863 to 15374879 16 - TSS region transcription start site region 146511
A930024N18Rik 17 15375000 to 15379475 4475 + lincRNA gene RIKEN cDNA A930024N18 gene
Tssr146512 17 15375218 to 15375264 46 - TSS region transcription start site region 146512
Tssr146513 17 15375969 to 15375983 14 - TSS region transcription start site region 146513