Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:14943062-15226268

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wdr27 17 14818519 to 14943158 124639 - protein coding gene WD repeat domain 27
1190001L17Rik 17 14939309 to 14943076 3767 unclassified gene RIKEN cDNA 1190001L17 gene
Cpgi8627 17 14942855 to 14943969 1114 CpG island CpG island 8627
Tssr5015 17 14943059 to 14943086 27 - TSS region transcription start site region 5015
Tssr146504 17 14943100 to 14943111 11 - TSS region transcription start site region 146504
Tssr146505 17 14943114 to 14943151 37 - TSS region transcription start site region 146505
1600012H06Rik 17 14943184 to 14945939 2755 + protein coding gene RIKEN cDNA 1600012H06 gene
Tssr142745 17 14943189 to 14943201 12 + TSS region transcription start site region 142745
Tssr142746 17 14943204 to 14943281 77 + TSS region transcription start site region 142746
Phf10 17 14945009 to 14961273 16264 - protein coding gene PHD finger protein 10
Tssr142747 17 14945145 to 14945164 19 + TSS region transcription start site region 142747
Tssr142748 17 14945298 to 14945325 27 + TSS region transcription start site region 142748
Tssr142749 17 14945518 to 14945550 32 + TSS region transcription start site region 142749
Cpgi8628 17 14960600 to 14961186 586 CpG island CpG island 8628
Tssr5016 17 14961229 to 14961304 75 - TSS region transcription start site region 5016
Gm3417 17 14964242 to 14978790 14548 - protein coding gene predicted gene 3417
9030025P20Rik 17 14978806 to 14991577 12771 + protein coding gene RIKEN cDNA 9030025P20 gene
Gm3255 17 14987880 to 14990704 2824 - unclassified gene predicted gene 3255
Gm3448 17 14995783 to 15010184 14401 - protein coding gene predicted gene 3448
Gm3435 17 15010176 to 15022449 12273 + protein coding gene predicted gene 3435
Tcte3 17 15027152 to 15041488 14336 - protein coding gene t-complex-associated testis expressed 3
Tssr146506 17 15041457 to 15041469 12 - TSS region transcription start site region 146506
Ermard 17 15041549 to 15090045 48496 + protein coding gene ER membrane associated RNA degradation
Gm35343 17 15046761 to 15055107 8346 - lncRNA gene predicted gene, 35343
D17Mit78 17 15061815 to 15061912 97 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 78
Gm41532 17 15080746 to 15086138 5392 + lncRNA gene predicted gene, 41532
Gm35203 17 15084317 to 15086185 1868 - lncRNA gene predicted gene, 35203
D17Jcs27 17 15143789 to 15144000 211 DNA segment DNA segment, Chr 17, John C. Schimenti 27
Gm35455 17 15152122 to 15172191 20069 + lincRNA gene predicted gene, 35455
Gm35502 17 15195082 to 15206274 11192 + lncRNA gene predicted gene, 35502
4930432N10Rik 17 15207601 to 15209388 1787 unclassified gene RIKEN cDNA 4930432N10 gene