Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:14260887-14930892

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34567 17 14249851 to 14277755 27904 + lincRNA gene predicted gene, 34567
Tssr142735 17 14261053 to 14261054 1 + TSS region transcription start site region 142735
Cpgi8626 17 14278967 to 14280871 1904 CpG island CpG island 8626
Tssr142736 17 14279506 to 14279513 7 + TSS region transcription start site region 142736
Smoc2 17 14279506 to 14404790 125284 + protein coding gene SPARC related modular calcium binding 2
Tssr142737 17 14279531 to 14279550 19 + TSS region transcription start site region 142737
D17Jcs34 17 14332737 to 14333003 266 DNA segment DNA segment, Chr 17, John C. Schimenti 34
D17Jcs33 17 14381888 to 14382135 247 DNA segment DNA segment, Chr 17, John C. Schimenti 33
4930474M22Rik 17 14389113 to 14398942 9829 - antisense lncRNA gene RIKEN cDNA 4930474M22 gene
Tssr146495 17 14398931 to 14398941 10 - TSS region transcription start site region 146495
Tssr5014 17 14398944 to 14398952 8 - TSS region transcription start site region 5014
Tssr142738 17 14399027 to 14399036 9 + TSS region transcription start site region 142738
Tssr142739 17 14399235 to 14399246 11 + TSS region transcription start site region 142739
Tssr142740 17 14399260 to 14399272 12 + TSS region transcription start site region 142740
Gm49720 17 14413490 to 14413946 456 + pseudogene predicted gene, 49720
Gm38551 17 14449882 to 14488180 38298 + lincRNA gene predicted gene, 38551
Gm34916 17 14503452 to 14522426 18974 - lncRNA gene predicted gene, 34916
Tssr142741 17 14512854 to 14512856 2 + TSS region transcription start site region 142741
D17Jcs32 17 14513737 to 14513939 202 DNA segment DNA segment, Chr 17, John C. Schimenti 32
Tssr142742 17 14546341 to 14546361 20 + TSS region transcription start site region 142742
D17Jcs31 17 14589645 to 14589922 277 DNA segment DNA segment, Chr 17, John C. Schimenti 31
Tssr142743 17 14595887 to 14595892 5 + TSS region transcription start site region 142743
Thbs2 17 14665500 to 14694235 28735 - protein coding gene thrombospondin 2
Tssr146496 17 14665626 to 14665630 4 - TSS region transcription start site region 146496
Tssr146497 17 14676235 to 14676239 4 - TSS region transcription start site region 146497
Tssr142744 17 14676984 to 14676992 8 + TSS region transcription start site region 142744
Tssr146498 17 14680006 to 14680015 9 - TSS region transcription start site region 146498
Tssr146499 17 14690147 to 14690162 15 - TSS region transcription start site region 146499
Tssr146500 17 14694082 to 14694099 17 - TSS region transcription start site region 146500
Tssr146501 17 14694223 to 14694242 19 - TSS region transcription start site region 146501
Gm3222 17 14709066 to 14710055 989 + pseudogene predicted pseudogene 3222
Gm23352 17 14791941 to 14792004 63 - snRNA gene predicted gene, 23352
Wdr27 17 14818519 to 14943158 124639 - protein coding gene WD repeat domain 27
Tssr146502 17 14909504 to 14909524 20 - TSS region transcription start site region 146502