Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:13867225-14249531

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Afdn 17 13760541 to 13905798 145257 + protein coding gene afadin, adherens junction formation factor
Tssr5012 17 13867565 to 13867596 31 + TSS region transcription start site region 5012
Tssr142721 17 13874478 to 13874500 22 + TSS region transcription start site region 142721
Tssr142722 17 13874522 to 13874537 15 + TSS region transcription start site region 142722
Tssr142723 17 13874538 to 13874557 19 + TSS region transcription start site region 142723
Tssr142724 17 13874562 to 13874582 20 + TSS region transcription start site region 142724
Tssr142725 17 13874901 to 13874912 11 + TSS region transcription start site region 142725
Tssr142726 17 13874916 to 13874926 10 + TSS region transcription start site region 142726
Tssr146490 17 13899204 to 13899211 7 - TSS region transcription start site region 146490
Gm49121 17 13911248 to 13936778 25530 + pseudogene predicted gene, 49121
Gm7168 17 13948373 to 13950678 2305 + protein coding gene predicted gene 7168
Gm33889 17 13991607 to 13998962 7355 - lncRNA gene predicted gene, 33889
Gm7356 17 14000224 to 14003393 3169 - protein coding gene predicted gene 7356
Gm34107 17 14050060 to 14057117 7057 - lncRNA gene predicted gene, 34107
Gm7358 17 14057225 to 14059531 2306 - protein coding gene predicted gene 7358
4930488N24Rik 17 14104924 to 14106450 1526 - pseudogene RIKEN cDNA 4930488N24 gene
Gm49903 17 14125868 to 14126297 429 - pseudogene predicted gene, 49903
D17Jcs122 17 14129978 to 14130192 214 DNA segment DNA segment, Chr 17, John C. Schimenti 122
Gm34426 17 14169641 to 14170941 1300 + lncRNA gene predicted gene, 34426
Tssr142727 17 14169692 to 14169703 11 + TSS region transcription start site region 142727
Tssr142728 17 14169707 to 14169733 26 + TSS region transcription start site region 142728
Dact2 17 14195230 to 14204337 9107 - protein coding gene dishevelled-binding antagonist of beta-catenin 2
Tssr5013 17 14202525 to 14202529 4 + TSS region transcription start site region 5013
Cpgi8625 17 14202989 to 14204299 1310 CpG island CpG island 8625
Tssr146491 17 14203695 to 14203779 84 - TSS region transcription start site region 146491
Gm34510 17 14203719 to 14212602 8883 + antisense lncRNA gene predicted gene, 34510
Tssr142729 17 14203720 to 14203765 45 + TSS region transcription start site region 142729
Tssr146492 17 14204234 to 14204251 17 - TSS region transcription start site region 146492
Tssr146493 17 14204257 to 14204281 24 - TSS region transcription start site region 146493
Gm41531 17 14226084 to 14239480 13396 + lncRNA gene predicted gene, 41531
Tssr142730 17 14226551 to 14226569 18 + TSS region transcription start site region 142730
D17Jcs35 17 14229341 to 14229597 256 DNA segment DNA segment, Chr 17, John C. Schimenti 35
Gm34772 17 14246418 to 14253614 7196 - lncRNA gene predicted gene, 34772