Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:13621550-13861558

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49936 17 13489273 to 13761378 272105 - lincRNA gene predicted gene, 49936
Tssr5010 17 13654842 to 13654850 8 + TSS region transcription start site region 5010
Gm41530 17 13658119 to 13665688 7569 + lncRNA gene predicted gene, 41530
Tssr5011 17 13659358 to 13659382 24 + TSS region transcription start site region 5011
Tssr146481 17 13674730 to 13674742 12 - TSS region transcription start site region 146481
Gm24867 17 13675376 to 13675482 106 + snRNA gene predicted gene, 24867
Gm16046 17 13675662 to 13683516 7854 - lincRNA gene predicted gene 16046
Tssr146482 17 13683485 to 13683523 38 - TSS region transcription start site region 146482
Tcte2 17 13716436 to 13761394 44958 - protein coding gene t-complex-associated testis expressed 2
Tssr146483 17 13741550 to 13741558 8 - TSS region transcription start site region 146483
Tssr146484 17 13741664 to 13741686 22 - TSS region transcription start site region 146484
Cpgi8624 17 13759807 to 13761952 2145 CpG island CpG island 8624
Tssr142711 17 13760292 to 13760335 43 + TSS region transcription start site region 142711
Tssr146485 17 13760354 to 13760402 48 - TSS region transcription start site region 146485
Tssr146486 17 13760404 to 13760426 22 - TSS region transcription start site region 146486
Tssr142712 17 13760502 to 13760600 98 + TSS region transcription start site region 142712
Afdn 17 13760541 to 13905798 145257 + protein coding gene afadin, adherens junction formation factor
Tssr146487 17 13761364 to 13761410 46 - TSS region transcription start site region 146487
Tssr146488 17 13761416 to 13761425 9 - TSS region transcription start site region 146488
Tssr146489 17 13761441 to 13761452 11 - TSS region transcription start site region 146489
Tssr142713 17 13779999 to 13780030 31 + TSS region transcription start site region 142713
Asrq8 17 13809908 to 13809908 0 QTL acoustic startle response 8
Tssr142714 17 13846088 to 13846093 5 + TSS region transcription start site region 142714
Tssr142715 17 13846095 to 13846119 24 + TSS region transcription start site region 142715
Tssr142716 17 13846153 to 13846160 7 + TSS region transcription start site region 142716
Tssr142717 17 13846172 to 13846183 11 + TSS region transcription start site region 142717
Tssr142718 17 13846191 to 13846196 5 + TSS region transcription start site region 142718
Tssr142719 17 13846757 to 13846766 9 + TSS region transcription start site region 142719
Tssr142720 17 13850050 to 13850055 5 + TSS region transcription start site region 142720