Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:13184026-13585580

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Mit222a 17 13184304 to 13184428 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 222a
Gm49898 17 13195878 to 13204448 8570 + lincRNA gene predicted gene, 49898
Gm10512 17 13205042 to 13206209 1167 + lncRNA gene predicted gene 10512
Smok2a 17 13221188 to 13227658 6470 + protein coding gene sperm motility kinase 2A
Tssr142710 17 13230210 to 13230214 4 + TSS region transcription start site region 142710
Smok2b 17 13230263 to 13237189 6926 + protein coding gene sperm motility kinase 2B
Gm26500 17 13249895 to 13250000 105 - snRNA gene predicted gene, 26500
Gm36589 17 13319921 to 13327352 7431 - lncRNA gene predicted gene, 36589
Gm36684 17 13330748 to 13333842 3094 + lincRNA gene predicted gene, 36684
Gpr31c 17 13344829 to 13345786 957 - pseudogene G protein-coupled receptor 31, D17Leh66c region
Tssr146480 17 13345800 to 13345802 2 - TSS region transcription start site region 146480
Gm36537 17 13349818 to 13354571 4753 - lncRNA gene predicted gene, 36537
Tcp10c 17 13354572 to 13377223 22651 + protein coding gene t-complex protein 10c
Gm19283 17 13384026 to 13385580 1554 - pseudogene predicted gene, 19283
Gm49934 17 13385186 to 13396325 11139 - unclassified gene predicted gene, 49934
Gm8597 17 13394025 to 13404191 10166 - pseudogene predicted gene 8597
Gm25730 17 13399042 to 13399206 164 - snRNA gene predicted gene, 25730
Rnu6 17 13432033 to 13432139 106 - snRNA gene U6 small nuclear RNA
D17Mit222b 17 13467561 to 13467669 108 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 222b
2700054A10Rik 17 13487021 to 13554094 67073 - lincRNA gene RIKEN cDNA 2700054A10 gene
Gm49936 17 13489273 to 13761378 272105 - lincRNA gene predicted gene, 49936
Gm16050 17 13500954 to 13511193 10239 + lincRNA gene predicted gene 16050
Gm8603 17 13516755 to 13518269 1514 + pseudogene predicted gene 8603
Smok4a 17 13521456 to 13528433 6977 + pseudogene sperm motility kinase 4A
Gm26375 17 13534064 to 13534169 105 - snRNA gene predicted gene, 26375