Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:13014304-13354428

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tme 17 12378609 to 13018119 639510 heritable phenotypic marker T-associated maternal effect
Sod2 17 13007839 to 13018119 10280 + protein coding gene superoxide dismutase 2, mitochondrial
Tssr142690 17 13014552 to 13014556 4 + TSS region transcription start site region 142690
Tssr142691 17 13015021 to 13015035 14 + TSS region transcription start site region 142691
Tssr142692 17 13015087 to 13015101 14 + TSS region transcription start site region 142692
Tssr142693 17 13015128 to 13015140 12 + TSS region transcription start site region 142693
Tssr142694 17 13015164 to 13015179 15 + TSS region transcription start site region 142694
Tssr142695 17 13015204 to 13015224 20 + TSS region transcription start site region 142695
Tssr142696 17 13015246 to 13015261 15 + TSS region transcription start site region 142696
Tssr142697 17 13015517 to 13015533 16 + TSS region transcription start site region 142697
Tssr142698 17 13016278 to 13016289 11 + TSS region transcription start site region 142698
Tssr142699 17 13016409 to 13016428 19 + TSS region transcription start site region 142699
Tssr142700 17 13016540 to 13016550 10 + TSS region transcription start site region 142700
Tssr142701 17 13016589 to 13016594 5 + TSS region transcription start site region 142701
Tssr142702 17 13016629 to 13016644 15 + TSS region transcription start site region 142702
Tssr142703 17 13016665 to 13016683 18 + TSS region transcription start site region 142703
Tssr142704 17 13016736 to 13016740 4 + TSS region transcription start site region 142704
Tssr142705 17 13016954 to 13016985 31 + TSS region transcription start site region 142705
Tssr142706 17 13017027 to 13017081 54 + TSS region transcription start site region 142706
Tssr142707 17 13017086 to 13017092 6 + TSS region transcription start site region 142707
Tssr142708 17 13017200 to 13017213 13 + TSS region transcription start site region 142708
Gm36117 17 13033560 to 13040063 6503 + lncRNA gene predicted gene, 36117
Gpr31b 17 13051321 to 13052280 959 - protein coding gene G protein-coupled receptor 31, D17Leh66b region
Gm36226 17 13054612 to 13061020 6408 - lncRNA gene predicted gene, 36226
Tssr142709 17 13061099 to 13061112 13 + TSS region transcription start site region 142709
Tcp10b 17 13061109 to 13082226 21117 + protein coding gene t-complex protein 10b
Gm11166 17 13096679 to 13098472 1793 - lncRNA gene predicted gene 11166
Unc93a 17 13108617 to 13131810 23193 - protein coding gene unc-93 homolog A
Gm23050 17 13120531 to 13120695 164 - snRNA gene predicted gene, 23050
Gm36277 17 13132603 to 13143678 11075 + lncRNA gene predicted gene, 36277
Gm36798 17 13170362 to 13183762 13400 - lncRNA gene predicted gene, 36798
D17Mit222a 17 13184304 to 13184428 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 222a
Gm49898 17 13195878 to 13204448 8570 + lincRNA gene predicted gene, 49898
Gm10512 17 13205042 to 13206209 1167 + lncRNA gene predicted gene 10512
Smok2a 17 13221188 to 13227658 6470 + protein coding gene sperm motility kinase 2A
Tssr142710 17 13230210 to 13230214 4 + TSS region transcription start site region 142710
Smok2b 17 13230263 to 13237189 6926 + protein coding gene sperm motility kinase 2B
Gm26500 17 13249895 to 13250000 105 - snRNA gene predicted gene, 26500
Gm36589 17 13319921 to 13327352 7431 - lncRNA gene predicted gene, 36589
Gm36684 17 13330748 to 13333842 3094 + lincRNA gene predicted gene, 36684
Gpr31c 17 13344829 to 13345786 957 - pseudogene G protein-coupled receptor 31, D17Leh66c region
Tssr146480 17 13345800 to 13345802 2 - TSS region transcription start site region 146480
Gm36537 17 13349818 to 13354571 4753 - lncRNA gene predicted gene, 36537