Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:12715627-12895652

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igf2r 17 12682406 to 12769664 87258 - protein coding gene insulin-like growth factor 2 receptor
Tssr146447 17 12716019 to 12716031 12 - TSS region transcription start site region 146447
Tssr146448 17 12725397 to 12725421 24 - TSS region transcription start site region 146448
Tssr146449 17 12740578 to 12740608 30 - TSS region transcription start site region 146449
Airn 17 12741311 to 12859884 118573 + antisense lncRNA gene antisense Igf2r RNA
Tssr142624 17 12741339 to 12741350 11 + TSS region transcription start site region 142624
Cpgi8613 17 12741360 to 12742660 1300 CpG island CpG island 8613
Tssr142625 17 12741360 to 12741384 24 + TSS region transcription start site region 142625
Tssr142626 17 12741385 to 12741399 14 + TSS region transcription start site region 142626
Tssr142627 17 12744692 to 12744700 8 + TSS region transcription start site region 142627
Tssr142628 17 12745851 to 12745887 36 + TSS region transcription start site region 142628
Tssr142629 17 12746488 to 12746500 12 + TSS region transcription start site region 142629
Tssr142630 17 12746531 to 12746543 12 + TSS region transcription start site region 142630
Tssr142631 17 12746671 to 12746684 13 + TSS region transcription start site region 142631
Tssr142632 17 12748375 to 12748379 4 + TSS region transcription start site region 142632
Tssr142633 17 12754813 to 12754827 14 + TSS region transcription start site region 142633
Tssr142634 17 12755434 to 12755456 22 + TSS region transcription start site region 142634
Tssr142635 17 12756018 to 12756032 14 + TSS region transcription start site region 142635
Tssr142636 17 12759189 to 12759201 12 + TSS region transcription start site region 142636
Tssr142637 17 12760178 to 12760183 5 + TSS region transcription start site region 142637
Tssr142638 17 12762929 to 12762935 6 + TSS region transcription start site region 142638
Tssr146450 17 12764013 to 12764016 3 - TSS region transcription start site region 146450
Tssr142639 17 12765349 to 12765375 26 + TSS region transcription start site region 142639
Cpgi8614 17 12769019 to 12770184 1165 CpG island CpG island 8614
Tssr146451 17 12769605 to 12769700 95 - TSS region transcription start site region 146451
Tssr146452 17 12769702 to 12769727 25 - TSS region transcription start site region 146452
Gm23833 17 12770631 to 12770882 251 + unclassified non-coding RNA gene predicted gene, 23833
Tssr142640 17 12775217 to 12775228 11 + TSS region transcription start site region 142640
Tssr142641 17 12775241 to 12775252 11 + TSS region transcription start site region 142641
Gm49959 17 12784882 to 12791660 6778 - lincRNA gene predicted gene, 49959
Tssr142642 17 12788311 to 12788326 15 + TSS region transcription start site region 142642
Tssr142643 17 12789175 to 12789186 11 + TSS region transcription start site region 142643
Tssr142644 17 12791093 to 12791097 4 + TSS region transcription start site region 142644
Tssr142645 17 12792885 to 12792906 21 + TSS region transcription start site region 142645
Tssr142646 17 12793341 to 12793344 3 + TSS region transcription start site region 142646
Tssr142647 17 12793935 to 12793938 3 + TSS region transcription start site region 142647
Gm49958 17 12795746 to 12800795 5049 - lincRNA gene predicted gene, 49958
D17Jcs62 17 12795884 to 12796085 201 DNA segment DNA segment, Chr 17, John C. Schimenti 62
Tssr142648 17 12798595 to 12798609 14 + TSS region transcription start site region 142648
Tssr142649 17 12798974 to 12799004 30 + TSS region transcription start site region 142649
Tssr142650 17 12799144 to 12799162 18 + TSS region transcription start site region 142650
Tssr142651 17 12805627 to 12805652 25 + TSS region transcription start site region 142651
Tssr142652 17 12806115 to 12806147 32 + TSS region transcription start site region 142652
Tssr142653 17 12807166 to 12807204 38 + TSS region transcription start site region 142653
Tssr142654 17 12810542 to 12810564 22 + TSS region transcription start site region 142654
Gm16574 17 12818793 to 12819537 744 + pseudogene predicted gene 16574
Gm7162 17 12819819 to 12820842 1023 - pseudogene predicted gene 7162
Tssr142655 17 12821537 to 12821555 18 + TSS region transcription start site region 142655
Tssr142656 17 12822085 to 12822088 3 + TSS region transcription start site region 142656
Tssr142657 17 12823403 to 12823417 14 + TSS region transcription start site region 142657
Gm17592 17 12837815 to 12838158 343 - pseudogene predicted gene, 17592
Mas1 17 12841079 to 12868143 27064 - protein coding gene MAS1 oncogene
Tssr146453 17 12851895 to 12851916 21 - TSS region transcription start site region 146453
Tssr142658 17 12859060 to 12859069 9 + TSS region transcription start site region 142658
Gm24085 17 12865125 to 12865240 115 - miRNA gene predicted gene, 24085
Tssr142659 17 12867024 to 12867037 13 + TSS region transcription start site region 142659
D17Jcs61 17 12867515 to 12867938 423 DNA segment DNA segment, Chr 17, John C. Schimenti 61
Tssr146454 17 12868126 to 12868148 22 - TSS region transcription start site region 146454
Mrgprh 17 12876034 to 12877842 1808 + protein coding gene MAS-related GPR, member H
Tssr142660 17 12878665 to 12878668 3 + TSS region transcription start site region 142660
Cpgi8615 17 12879963 to 12880381 418 CpG island CpG island 8615
Pnldc1 17 12888729 to 12910230 21501 - protein coding gene poly(A)-specific ribonuclease (PARN)-like domain containing 1
Tssr146455 17 12895572 to 12895579 7 - TSS region transcription start site region 146455
Tssr146456 17 12895593 to 12895609 16 - TSS region transcription start site region 146456