Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:12422739-12882753

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101 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
tclLub2 17 12378609 to 12675838 297229 heritable phenotypic marker t-complex lethal Lub2
Slc22a3 17 12419972 to 12507704 87732 - protein coding gene solute carrier family 22 (organic cation transporter), member 3
Gm3192 17 12430825 to 12431282 457 - pseudogene predicted gene 3192
Tssr142617 17 12466841 to 12466855 14 + TSS region transcription start site region 142617
C030013G03Rik 17 12466844 to 12479578 12734 + antisense lncRNA gene RIKEN cDNA C030013G03 gene
Cpgi8612 17 12506796 to 12507839 1043 CpG island CpG island 8612
Tssr146424 17 12507096 to 12507107 11 - TSS region transcription start site region 146424
Tssr146425 17 12507172 to 12507187 15 - TSS region transcription start site region 146425
Tssr146426 17 12507355 to 12507360 5 - TSS region transcription start site region 146426
Tssr146427 17 12507361 to 12507379 18 - TSS region transcription start site region 146427
Tssr146428 17 12507396 to 12507408 12 - TSS region transcription start site region 146428
Tssr146429 17 12507722 to 12507727 5 - TSS region transcription start site region 146429
D17Jcs64 17 12509508 to 12509784 276 DNA segment DNA segment, Chr 17, John C. Schimenti 64
Tssr5006 17 12550083 to 12550086 3 + TSS region transcription start site region 5006
Slc22a2 17 12584132 to 12628488 44356 + protein coding gene solute carrier family 22 (organic cation transporter), member 2
Tssr142618 17 12584183 to 12584195 12 + TSS region transcription start site region 142618
Tssr142619 17 12584215 to 12584236 21 + TSS region transcription start site region 142619
Tssr142620 17 12596344 to 12596360 16 + TSS region transcription start site region 142620
Tssr142621 17 12614707 to 12614716 9 + TSS region transcription start site region 142621
Tssr142622 17 12614749 to 12614755 6 + TSS region transcription start site region 142622
Tssr142623 17 12615283 to 12615290 7 + TSS region transcription start site region 142623
Slc22a1 17 12648869 to 12675829 26960 - protein coding gene solute carrier family 22 (organic cation transporter), member 1
Tssr146430 17 12652641 to 12652652 11 - TSS region transcription start site region 146430
Tssr146431 17 12652670 to 12652679 9 - TSS region transcription start site region 146431
Tssr146432 17 12652739 to 12652753 14 - TSS region transcription start site region 146432
Tssr146433 17 12674803 to 12674807 4 - TSS region transcription start site region 146433
Tssr146434 17 12675698 to 12675714 16 - TSS region transcription start site region 146434
Tssr146435 17 12675728 to 12675739 11 - TSS region transcription start site region 146435
Tssr146436 17 12675742 to 12675775 33 - TSS region transcription start site region 146436
Tssr146437 17 12675786 to 12675807 21 - TSS region transcription start site region 146437
Tssr146438 17 12675833 to 12675844 11 - TSS region transcription start site region 146438
D17Jcs63 17 12677353 to 12677526 173 DNA segment DNA segment, Chr 17, John C. Schimenti 63
Igf2r 17 12682406 to 12769664 87258 - protein coding gene insulin-like growth factor 2 receptor
Tssr146439 17 12682815 to 12682820 5 - TSS region transcription start site region 146439
Tssr146440 17 12688558 to 12688565 7 - TSS region transcription start site region 146440
Tssr146441 17 12688769 to 12688774 5 - TSS region transcription start site region 146441
Tssr146442 17 12691981 to 12691986 5 - TSS region transcription start site region 146442
Tssr146443 17 12691996 to 12692012 16 - TSS region transcription start site region 146443
Tssr146444 17 12692018 to 12692021 3 - TSS region transcription start site region 146444
Tssr146445 17 12692036 to 12692044 8 - TSS region transcription start site region 146445
Tssr146446 17 12692047 to 12692067 20 - TSS region transcription start site region 146446
Tssr146447 17 12716019 to 12716031 12 - TSS region transcription start site region 146447
Tssr146448 17 12725397 to 12725421 24 - TSS region transcription start site region 146448
Tssr146449 17 12740578 to 12740608 30 - TSS region transcription start site region 146449
Airn 17 12741311 to 12859884 118573 + antisense lncRNA gene antisense Igf2r RNA
Tssr142624 17 12741339 to 12741350 11 + TSS region transcription start site region 142624
Cpgi8613 17 12741360 to 12742660 1300 CpG island CpG island 8613
Tssr142625 17 12741360 to 12741384 24 + TSS region transcription start site region 142625
Tssr142626 17 12741385 to 12741399 14 + TSS region transcription start site region 142626
Tssr142627 17 12744692 to 12744700 8 + TSS region transcription start site region 142627
Tssr142628 17 12745851 to 12745887 36 + TSS region transcription start site region 142628
Tssr142629 17 12746488 to 12746500 12 + TSS region transcription start site region 142629
Tssr142630 17 12746531 to 12746543 12 + TSS region transcription start site region 142630
Tssr142631 17 12746671 to 12746684 13 + TSS region transcription start site region 142631
Tssr142632 17 12748375 to 12748379 4 + TSS region transcription start site region 142632
Tssr142633 17 12754813 to 12754827 14 + TSS region transcription start site region 142633
Tssr142634 17 12755434 to 12755456 22 + TSS region transcription start site region 142634
Tssr142635 17 12756018 to 12756032 14 + TSS region transcription start site region 142635
Tssr142636 17 12759189 to 12759201 12 + TSS region transcription start site region 142636
Tssr142637 17 12760178 to 12760183 5 + TSS region transcription start site region 142637
Tssr142638 17 12762929 to 12762935 6 + TSS region transcription start site region 142638
Tssr146450 17 12764013 to 12764016 3 - TSS region transcription start site region 146450
Tssr142639 17 12765349 to 12765375 26 + TSS region transcription start site region 142639
Cpgi8614 17 12769019 to 12770184 1165 CpG island CpG island 8614
Tssr146451 17 12769605 to 12769700 95 - TSS region transcription start site region 146451
Tssr146452 17 12769702 to 12769727 25 - TSS region transcription start site region 146452
Gm23833 17 12770631 to 12770882 251 + unclassified non-coding RNA gene predicted gene, 23833
Tssr142640 17 12775217 to 12775228 11 + TSS region transcription start site region 142640
Tssr142641 17 12775241 to 12775252 11 + TSS region transcription start site region 142641
Gm49959 17 12784882 to 12791660 6778 - lincRNA gene predicted gene, 49959
Tssr142642 17 12788311 to 12788326 15 + TSS region transcription start site region 142642
Tssr142643 17 12789175 to 12789186 11 + TSS region transcription start site region 142643
Tssr142644 17 12791093 to 12791097 4 + TSS region transcription start site region 142644
Tssr142645 17 12792885 to 12792906 21 + TSS region transcription start site region 142645
Tssr142646 17 12793341 to 12793344 3 + TSS region transcription start site region 142646
Tssr142647 17 12793935 to 12793938 3 + TSS region transcription start site region 142647
Gm49958 17 12795746 to 12800795 5049 - lincRNA gene predicted gene, 49958
D17Jcs62 17 12795884 to 12796085 201 DNA segment DNA segment, Chr 17, John C. Schimenti 62
Tssr142648 17 12798595 to 12798609 14 + TSS region transcription start site region 142648
Tssr142649 17 12798974 to 12799004 30 + TSS region transcription start site region 142649
Tssr142650 17 12799144 to 12799162 18 + TSS region transcription start site region 142650
Tssr142651 17 12805627 to 12805652 25 + TSS region transcription start site region 142651
Tssr142652 17 12806115 to 12806147 32 + TSS region transcription start site region 142652
Tssr142653 17 12807166 to 12807204 38 + TSS region transcription start site region 142653
Tssr142654 17 12810542 to 12810564 22 + TSS region transcription start site region 142654
Gm16574 17 12818793 to 12819537 744 + pseudogene predicted gene 16574
Gm7162 17 12819819 to 12820842 1023 - pseudogene predicted gene 7162
Tssr142655 17 12821537 to 12821555 18 + TSS region transcription start site region 142655
Tssr142656 17 12822085 to 12822088 3 + TSS region transcription start site region 142656
Tssr142657 17 12823403 to 12823417 14 + TSS region transcription start site region 142657
Gm17592 17 12837815 to 12838158 343 - pseudogene predicted gene, 17592
Mas1 17 12841079 to 12868143 27064 - protein coding gene MAS1 oncogene
Tssr146453 17 12851895 to 12851916 21 - TSS region transcription start site region 146453
Tssr142658 17 12859060 to 12859069 9 + TSS region transcription start site region 142658
Gm24085 17 12865125 to 12865240 115 - miRNA gene predicted gene, 24085
Tssr142659 17 12867024 to 12867037 13 + TSS region transcription start site region 142659
D17Jcs61 17 12867515 to 12867938 423 DNA segment DNA segment, Chr 17, John C. Schimenti 61
Tssr146454 17 12868126 to 12868148 22 - TSS region transcription start site region 146454
Mrgprh 17 12876034 to 12877842 1808 + protein coding gene MAS-related GPR, member H
Tssr142660 17 12878665 to 12878668 3 + TSS region transcription start site region 142660
Cpgi8615 17 12879963 to 12880381 418 CpG island CpG island 8615