Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:12392361-12622379

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plg 17 12378609 to 12419384 40775 + protein coding gene plasminogen
Tssr146421 17 12393125 to 12393136 11 - TSS region transcription start site region 146421
Tssr142607 17 12393164 to 12393174 10 + TSS region transcription start site region 142607
Tssr142608 17 12395617 to 12395637 20 + TSS region transcription start site region 142608
Tssr146422 17 12395657 to 12395682 25 - TSS region transcription start site region 146422
Tssr142609 17 12396601 to 12396612 11 + TSS region transcription start site region 142609
Tssr142610 17 12396631 to 12396640 9 + TSS region transcription start site region 142610
Tssr142611 17 12403091 to 12403102 11 + TSS region transcription start site region 142611
Tssr142612 17 12404079 to 12404090 11 + TSS region transcription start site region 142612
Tssr142613 17 12409054 to 12409073 19 + TSS region transcription start site region 142613
Tssr142614 17 12410898 to 12410935 37 + TSS region transcription start site region 142614
Ceat1 17 12417795 to 26182159 13764364 QTL chronic experimental autoimmune thyroiditis 1
D17Mit114 17 12417795 to 12417944 149 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 114
Tssr142615 17 12419031 to 12419046 15 + TSS region transcription start site region 142615
Slc22a3 17 12419972 to 12507704 87732 - protein coding gene solute carrier family 22 (organic cation transporter), member 3
Tssr146423 17 12420451 to 12420456 5 - TSS region transcription start site region 146423
Tssr142616 17 12420928 to 12420933 5 + TSS region transcription start site region 142616
Gm3192 17 12430825 to 12431282 457 - pseudogene predicted gene 3192
Tssr142617 17 12466841 to 12466855 14 + TSS region transcription start site region 142617
C030013G03Rik 17 12466844 to 12479578 12734 + antisense lncRNA gene RIKEN cDNA C030013G03 gene
Cpgi8612 17 12506796 to 12507839 1043 CpG island CpG island 8612
Tssr146424 17 12507096 to 12507107 11 - TSS region transcription start site region 146424
Tssr146425 17 12507172 to 12507187 15 - TSS region transcription start site region 146425
Tssr146426 17 12507355 to 12507360 5 - TSS region transcription start site region 146426
Tssr146427 17 12507361 to 12507379 18 - TSS region transcription start site region 146427
Tssr146428 17 12507396 to 12507408 12 - TSS region transcription start site region 146428
Tssr146429 17 12507722 to 12507727 5 - TSS region transcription start site region 146429
D17Jcs64 17 12509508 to 12509784 276 DNA segment DNA segment, Chr 17, John C. Schimenti 64
Tssr5006 17 12550083 to 12550086 3 + TSS region transcription start site region 5006
Slc22a2 17 12584132 to 12628488 44356 + protein coding gene solute carrier family 22 (organic cation transporter), member 2
Tssr142618 17 12584183 to 12584195 12 + TSS region transcription start site region 142618
Tssr142619 17 12584215 to 12584236 21 + TSS region transcription start site region 142619
Tssr142620 17 12596344 to 12596360 16 + TSS region transcription start site region 142620
Tssr142621 17 12614707 to 12614716 9 + TSS region transcription start site region 142621
Tssr142622 17 12614749 to 12614755 6 + TSS region transcription start site region 142622
Tssr142623 17 12615283 to 12615290 7 + TSS region transcription start site region 142623