Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:10718480-11534237

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pacrg 17 10403009 to 10840191 437182 - protein coding gene PARK2 co-regulated
Tssr146402 17 10721537 to 10721550 13 - TSS region transcription start site region 146402
Tssr146403 17 10721555 to 10721558 3 - TSS region transcription start site region 146403
Gm16169 17 10807716 to 10818826 11110 + lncRNA gene predicted gene 16169
Tssr142580 17 10807827 to 10807841 14 + TSS region transcription start site region 142580
Cpgi8609 17 10839810 to 10841128 1318 CpG island CpG island 8609
Tssr146404 17 10839991 to 10840000 9 - TSS region transcription start site region 146404
Tssr146405 17 10840106 to 10840120 14 - TSS region transcription start site region 146405
Tssr146406 17 10840125 to 10840197 72 - TSS region transcription start site region 146406
Tssr146407 17 10840251 to 10840263 12 - TSS region transcription start site region 146407
Tssr146408 17 10840273 to 10840284 11 - TSS region transcription start site region 146408
Tssr146409 17 10840285 to 10840299 14 - TSS region transcription start site region 146409
Tssr146410 17 10840315 to 10840323 8 - TSS region transcription start site region 146410
Tssr142581 17 10840361 to 10840405 44 + TSS region transcription start site region 142581
Prkn 17 10840384 to 12063361 1222977 + protein coding gene parkin RBR E3 ubiquitin protein ligase
Tssr142582 17 10840422 to 10840437 15 + TSS region transcription start site region 142582
Tssr146411 17 10840565 to 10840585 20 - TSS region transcription start site region 146411
D17Jcs117 17 10855525 to 10855843 318 DNA segment DNA segment, Chr 17, John C. Schimenti 117
Tssr142583 17 10865099 to 10865103 4 + TSS region transcription start site region 142583
Gm3145 17 10898995 to 10899214 219 + pseudogene predicted gene 3145
Lfnq4 17 10987597 to 39053168 28065571 QTL lung function QTL 4
D17Mit156 17 10987597 to 10987721 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 156
D17Jcs75 17 10995515 to 10995719 204 DNA segment DNA segment, Chr 17, John C. Schimenti 75
Flal1 17 11000000 to 8000000 -3000000 QTL fatty liver accumulation QTL 1, females only
Gm28505 17 11082250 to 11089468 7218 - antisense lncRNA gene predicted gene 28505
Gm41526 17 11118480 to 11134237 15757 - lncRNA gene predicted gene, 41526
Gm37402 17 11249344 to 11254343 4999 + unclassified gene predicted gene, 37402
Gm37332 17 11283922 to 11286765 2843 - unclassified gene predicted gene, 37332
Tssr142584 17 11329294 to 11329336 42 + TSS region transcription start site region 142584
Tssr142585 17 11329607 to 11329623 16 + TSS region transcription start site region 142585
D17Dcr31 17 11352350 to 11352449 99 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 31
Tssr146412 17 11385373 to 11385382 9 - TSS region transcription start site region 146412
Tssr146413 17 11385402 to 11385409 7 - TSS region transcription start site region 146413
D17Jcs72 17 11519923 to 11520095 172 DNA segment DNA segment, Chr 17, John C. Schimenti 72